Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF439Q8NDP4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 AC009102.2-201ENST00000606772 1639 ntBASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF439Q8NDP4 AC079834.2-201ENST00000609776 1949 ntBASIC18.27■□□□□ 0.51
ZNF439Q8NDP4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF439Q8NDP4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.27■□□□□ 0.51
ZNF439Q8NDP4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
ZNF439Q8NDP4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 MIR6724-1-201ENST00000616420 92 ntBASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 MIR6724-2-201ENST00000616483 92 ntBASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 MIR6724-4-201ENST00000617390 92 ntBASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 MIR6724-3-201ENST00000622482 92 ntBASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 FP325331.1-202ENST00000623531 1380 ntBASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF439Q8NDP4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 GUSBP5-201ENST00000418136 578 ntBASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 C1orf229-201ENST00000623686 2258 ntBASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF439Q8NDP4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 LINC01529-204ENST00000636474 1715 ntBASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF439Q8NDP4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF439Q8NDP4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 KRT16P3-201ENST00000439127 1283 ntBASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 DUX4L4-201ENST00000566884 1269 ntBASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF439Q8NDP4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF439Q8NDP4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms