Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNRF1Q8ND25 C1orf229-201ENST00000623686 2258 ntBASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 pRNA.6-201ENST00000610482 90 ntBASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 pRNA.5-201ENST00000612139 90 ntBASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 pRNA.11-201ENST00000618423 90 ntBASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 pRNA.13-201ENST00000619112 90 ntBASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNRF1Q8ND25 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 AL499627.2-201ENST00000606283 725 ntBASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 AC004687.1-201ENST00000579003 1625 ntBASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNRF1Q8ND25 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 SYT6-210ENST00000641643 1587 ntBASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 MIR3181-201ENST00000578512 73 ntBASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNRF1Q8ND25 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 DUX4L19-201ENST00000557448 1267 ntBASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNRF1Q8ND25 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.46■□□□□ 0.54
ZNRF1Q8ND25 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.46■□□□□ 0.54
ZNRF1Q8ND25 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNRF1Q8ND25 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 AC133637.1-201ENST00000624115 1537 ntBASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 SERBP1P1-201ENST00000396021 1160 ntBASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNRF1Q8ND25 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms