Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LINC00471Q8N535 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00471Q8N535 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00471Q8N535 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00471Q8N535 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00471Q8N535 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LINC00471Q8N535 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00471Q8N535 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00471Q8N535 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00471Q8N535 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00471Q8N535 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00471Q8N535 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00471Q8N535 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00471Q8N535 MIR4508-201ENST00000584178 70 ntBASIC20.23■□□□□ 0.83
LINC00471Q8N535 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LINC00471Q8N535 LINC01529-204ENST00000636474 1715 ntBASIC20.23■□□□□ 0.83
LINC00471Q8N535 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
LINC00471Q8N535 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00471Q8N535 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00471Q8N535 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC00471Q8N535 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00471Q8N535 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00471Q8N535 AC004987.1-201ENST00000428627 508 ntBASIC20.22■□□□□ 0.83
LINC00471Q8N535 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC00471Q8N535 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00471Q8N535 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 AC080038.3-201ENST00000623346 1952 ntBASIC20.21■□□□□ 0.83
LINC00471Q8N535 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00471Q8N535 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00471Q8N535 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC00471Q8N535 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
LINC00471Q8N535 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00471Q8N535 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00471Q8N535 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00471Q8N535 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00471Q8N535 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LINC00471Q8N535 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00471Q8N535 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00471Q8N535 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00471Q8N535 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC00471Q8N535 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00471Q8N535 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC00471Q8N535 TSPY13P-201ENST00000338964 914 ntBASIC20.19■□□□□ 0.82
LINC00471Q8N535 AC010980.1-201ENST00000587192 1142 ntBASIC20.19■□□□□ 0.82
LINC00471Q8N535 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00471Q8N535 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LINC00471Q8N535 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00471Q8N535 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
LINC00471Q8N535 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LINC00471Q8N535 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00471Q8N535 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00471Q8N535 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00471Q8N535 AC009086.3-201ENST00000623486 1008 ntBASIC20.18■□□□□ 0.82
LINC00471Q8N535 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LINC00471Q8N535 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00471Q8N535 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 AC005703.6-201ENST00000623265 1329 ntBASIC20.17■□□□□ 0.82
LINC00471Q8N535 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LINC00471Q8N535 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00471Q8N535 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LINC00471Q8N535 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC00471Q8N535 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LINC00471Q8N535 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms