Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 AC126544.1-201ENST00000580842 1059 ntBASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM48Q8IWZ4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TRIM48Q8IWZ4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM48Q8IWZ4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM48Q8IWZ4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM48Q8IWZ4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM48Q8IWZ4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM48Q8IWZ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM48Q8IWZ4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM48Q8IWZ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 AL353803.4-201ENST00000565882 1934 ntBASIC21.61■■□□□ 1.05
TRIM48Q8IWZ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM48Q8IWZ4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms