Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC120024.1-201ENST00000562672 995 ntBASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NUDCD3Q8IVD9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NUDCD3Q8IVD9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 AC139795.1-202ENST00000500444 432 ntBASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NUDCD3Q8IVD9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 AC087742.1-201ENST00000575880 1738 ntBASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.94■■□□□ 1.1
NUDCD3Q8IVD9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 KRT18P60-201ENST00000312876 1297 ntBASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 RARRES2P2-201ENST00000394842 485 ntBASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUDCD3Q8IVD9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.92■■□□□ 1.1
NUDCD3Q8IVD9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUDCD3Q8IVD9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUDCD3Q8IVD9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUDCD3Q8IVD9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUDCD3Q8IVD9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 AL024507.2-201ENST00000606070 2574 ntBASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NUDCD3Q8IVD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
NUDCD3Q8IVD9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NUDCD3Q8IVD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 MIR4281-201ENST00000580852 62 ntBASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUDCD3Q8IVD9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 DUX4L18-201ENST00000553347 1267 ntBASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 AC144652.1-201ENST00000609974 1624 ntBASIC21.88■■□□□ 1.09
NUDCD3Q8IVD9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUDCD3Q8IVD9 KRT18P24-201ENST00000344739 1156 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms