Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC71Q8IV32 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 AC005837.3-201ENST00000612163 286 ntBASIC20.72■□□□□ 0.91
CCDC71Q8IV32 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC71Q8IV32 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC71Q8IV32 SNX5-217ENST00000606557 1087 ntBASIC20.7■□□□□ 0.9
CCDC71Q8IV32 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71Q8IV32 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71Q8IV32 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC71Q8IV32 AL161729.1-201ENST00000604104 1402 ntBASIC20.7■□□□□ 0.9
CCDC71Q8IV32 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC71Q8IV32 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC71Q8IV32 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 AL024507.2-201ENST00000606070 2574 ntBASIC20.67■□□□□ 0.9
CCDC71Q8IV32 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC71Q8IV32 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC71Q8IV32 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 MIR6722-201ENST00000617286 78 ntBASIC20.65■□□□□ 0.9
CCDC71Q8IV32 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC71Q8IV32 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC71Q8IV32 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC71Q8IV32 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms