Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 MIR935-201ENST00000401179 91 ntBASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 AC136469.2-201ENST00000623944 1028 ntBASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.03■□□□□ 0.96
LAPTM4BQ86VI4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 FP325331.1-202ENST00000623531 1380 ntBASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.02■□□□□ 0.96
LAPTM4BQ86VI4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LAPTM4BQ86VI4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LAPTM4BQ86VI4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LAPTM4BQ86VI4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 AC144652.1-201ENST00000609974 1624 ntBASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 AC008764.7-201ENST00000593779 1081 ntBASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.01■□□□□ 0.95
LAPTM4BQ86VI4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LAPTM4BQ86VI4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LAPTM4BQ86VI4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 LINC01529-204ENST00000636474 1715 ntBASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 DUX4L4-201ENST00000566884 1269 ntBASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 AC079630.1-202ENST00000618127 1840 ntBASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LAPTM4BQ86VI4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 AC091305.1-201ENST00000479476 895 ntBASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.97■□□□□ 0.95
LAPTM4BQ86VI4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms