Protein–RNA interactions for Protein: Q86UT5

PDZD3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3Q86UT5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PDZD3Q86UT5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
PDZD3Q86UT5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
PDZD3Q86UT5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD3Q86UT5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZD3Q86UT5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 AC008764.7-201ENST00000593779 1081 ntBASIC21.83■■□□□ 1.09
PDZD3Q86UT5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZD3Q86UT5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD3Q86UT5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD3Q86UT5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZD3Q86UT5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PDZD3Q86UT5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZD3Q86UT5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 AL353803.4-201ENST00000565882 1934 ntBASIC21.8■■□□□ 1.08
PDZD3Q86UT5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZD3Q86UT5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 ABHD17AP1-201ENST00000358206 933 ntBASIC21.79■■□□□ 1.08
PDZD3Q86UT5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.79■■□□□ 1.08
PDZD3Q86UT5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.79■■□□□ 1.08
PDZD3Q86UT5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDZD3Q86UT5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDZD3Q86UT5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.77■■□□□ 1.08
PDZD3Q86UT5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 SERBP1P1-201ENST00000396021 1160 ntBASIC21.77■■□□□ 1.08
PDZD3Q86UT5 AC099791.1-201ENST00000416440 715 ntBASIC21.77■■□□□ 1.08
PDZD3Q86UT5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.77■■□□□ 1.08
PDZD3Q86UT5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDZD3Q86UT5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
PDZD3Q86UT5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PDZD3Q86UT5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZD3Q86UT5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDZD3Q86UT5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PDZD3Q86UT5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZD3Q86UT5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms