Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 AC079630.1-202ENST00000618127 1840 ntBASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 MIR3960-201ENST00000583311 91 ntBASIC18.38■□□□□ 0.53
ZNF546Q86UE3 CR559946.2-201ENST00000623684 991 ntBASIC18.38■□□□□ 0.53
ZNF546Q86UE3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF546Q86UE3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF546Q86UE3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 AC080038.3-201ENST00000623346 1952 ntBASIC18.36■□□□□ 0.53
ZNF546Q86UE3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF546Q86UE3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF546Q86UE3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF546Q86UE3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF546Q86UE3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF546Q86UE3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
ZNF546Q86UE3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF546Q86UE3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF546Q86UE3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 AC025884.2-201ENST00000553429 711 ntBASIC18.33■□□□□ 0.52
ZNF546Q86UE3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF546Q86UE3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 AL157400.5-201ENST00000507624 621 ntBASIC18.32■□□□□ 0.52
ZNF546Q86UE3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF546Q86UE3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF546Q86UE3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms