Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD3Q7Z407 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 OR2I1P-207ENST00000453522 948 ntBASIC15.62■□□□□ 0.09
CSMD3Q7Z407 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.62■□□□□ 0.09
CSMD3Q7Z407 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 CD99P1-205ENST00000527459 561 ntBASIC15.61■□□□□ 0.09
CSMD3Q7Z407 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSMD3Q7Z407 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD3Q7Z407 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 MFSD11-216ENST00000590393 1141 ntBASIC15.59■□□□□ 0.09
CSMD3Q7Z407 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 LINC02228-203ENST00000641970 1355 ntBASIC15.59■□□□□ 0.09
CSMD3Q7Z407 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 AC141586.4-201ENST00000624558 1573 ntBASIC15.59■□□□□ 0.09
CSMD3Q7Z407 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD3Q7Z407 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD3Q7Z407 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD3Q7Z407 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 GPX1P1-201ENST00000388829 606 ntBASIC15.57■□□□□ 0.08
CSMD3Q7Z407 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 AC073210.2-201ENST00000430369 194 ntBASIC15.57■□□□□ 0.08
CSMD3Q7Z407 AC098590.1-201ENST00000468126 897 ntBASIC15.57■□□□□ 0.08
CSMD3Q7Z407 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD3Q7Z407 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms