Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 AC233723.2-201ENST00000623798 2106 ntBASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 LINC01529-204ENST00000636474 1715 ntBASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST3H2AQ7L7L0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HIST3H2AQ7L7L0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.08■□□□□ 0.81
HIST3H2AQ7L7L0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.08■□□□□ 0.8
HIST3H2AQ7L7L0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HIST3H2AQ7L7L0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HIST3H2AQ7L7L0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST3H2AQ7L7L0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.06■□□□□ 0.8
HIST3H2AQ7L7L0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 AL117328.2-201ENST00000624617 1940 ntBASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST3H2AQ7L7L0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST3H2AQ7L7L0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 MIR6724-1-201ENST00000616420 92 ntBASIC20.03■□□□□ 0.8
HIST3H2AQ7L7L0 MIR6724-2-201ENST00000616483 92 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms