Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 AC092171.4-201ENST00000609130 632 ntBASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.67■■□□□ 1.54
LRRC55Q6ZSA7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 AC092666.2-201ENST00000613287 246 ntBASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.66■■□□□ 1.54
LRRC55Q6ZSA7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 AC091305.1-201ENST00000479476 895 ntBASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC55Q6ZSA7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
LRRC55Q6ZSA7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.64■■□□□ 1.54
LRRC55Q6ZSA7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 C17orf82-201ENST00000623772 1530 ntBASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
LRRC55Q6ZSA7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 C1orf229-201ENST00000623686 2258 ntBASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC55Q6ZSA7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 CA15P2-201ENST00000611168 834 ntBASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC55Q6ZSA7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
LRRC55Q6ZSA7 RASA4CP-201ENST00000424092 1398 ntBASIC24.6■■□□□ 1.53
LRRC55Q6ZSA7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
LRRC55Q6ZSA7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRC55Q6ZSA7 AC011298.3-201ENST00000615796 283 ntBASIC24.6■■□□□ 1.53
LRRC55Q6ZSA7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 AL353803.4-201ENST00000565882 1934 ntBASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 AL138724.1-201ENST00000606771 1088 ntBASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC55Q6ZSA7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 AC006455.2-201ENST00000429931 906 ntBASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 MIR5787-201ENST00000611784 55 ntBASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC55Q6ZSA7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
LRRC55Q6ZSA7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 AC008764.7-201ENST00000593779 1081 ntBASIC24.57■■□□□ 1.52
LRRC55Q6ZSA7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms