Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NHLRC1Q6VVB1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NHLRC1Q6VVB1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.83■□□□□ 0.77
NHLRC1Q6VVB1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NHLRC1Q6VVB1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NHLRC1Q6VVB1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 C1orf229-201ENST00000623686 2258 ntBASIC19.81■□□□□ 0.76
NHLRC1Q6VVB1 AL117328.2-201ENST00000624617 1940 ntBASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NHLRC1Q6VVB1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 AL499627.2-201ENST00000606283 725 ntBASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.79■□□□□ 0.76
NHLRC1Q6VVB1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 MIR4466-201ENST00000606121 54 ntBASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NHLRC1Q6VVB1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms