Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC004448.1-201ENST00000458332 883 ntBASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC091305.1-201ENST00000479476 895 ntBASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC090192.1-201ENST00000517740 490 ntBASIC18.04■□□□□ 0.48
TREML4Q6UXN2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TREML4Q6UXN2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 AP001330.3-201ENST00000520123 633 ntBASIC18.03■□□□□ 0.48
TREML4Q6UXN2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 AL161729.1-201ENST00000604104 1402 ntBASIC18.03■□□□□ 0.48
TREML4Q6UXN2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TREML4Q6UXN2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 DUX4L19-201ENST00000557448 1267 ntBASIC18.02■□□□□ 0.48
TREML4Q6UXN2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 MIR6722-201ENST00000617286 78 ntBASIC18.02■□□□□ 0.48
TREML4Q6UXN2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 RARRES2P11-201ENST00000635158 484 ntBASIC18.02■□□□□ 0.48
TREML4Q6UXN2 AF131216.4-201ENST00000638924 1588 ntBASIC18.02■□□□□ 0.48
TREML4Q6UXN2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.02■□□□□ 0.48
TREML4Q6UXN2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TREML4Q6UXN2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TREML4Q6UXN2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TREML4Q6UXN2 AC090877.2-201ENST00000558441 1738 ntBASIC18.01■□□□□ 0.47
TREML4Q6UXN2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TREML4Q6UXN2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18■□□□□ 0.47
TREML4Q6UXN2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18■□□□□ 0.47
TREML4Q6UXN2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
TREML4Q6UXN2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18■□□□□ 0.47
TREML4Q6UXN2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18■□□□□ 0.47
TREML4Q6UXN2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18■□□□□ 0.47
TREML4Q6UXN2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18■□□□□ 0.47
TREML4Q6UXN2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREML4Q6UXN2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18■□□□□ 0.47
TREML4Q6UXN2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 GUSBP5-202ENST00000510805 1989 ntBASIC17.99■□□□□ 0.47
TREML4Q6UXN2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 LINC00526-201ENST00000581067 1875 ntBASIC17.99■□□□□ 0.47
TREML4Q6UXN2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREML4Q6UXN2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.98■□□□□ 0.47
TREML4Q6UXN2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms