Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S3Q6QNY0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BLOC1S3Q6QNY0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S3Q6QNY0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BLOC1S3Q6QNY0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.14■□□□□ 0.98
BLOC1S3Q6QNY0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
BLOC1S3Q6QNY0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BLOC1S3Q6QNY0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 AC010980.1-201ENST00000587192 1142 ntBASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
BLOC1S3Q6QNY0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BLOC1S3Q6QNY0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
BLOC1S3Q6QNY0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
BLOC1S3Q6QNY0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 LINC01529-204ENST00000636474 1715 ntBASIC21.09■□□□□ 0.97
BLOC1S3Q6QNY0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 MIR4508-201ENST00000584178 70 ntBASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.08■□□□□ 0.97
BLOC1S3Q6QNY0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 FP325331.1-202ENST00000623531 1380 ntBASIC21.08■□□□□ 0.96
BLOC1S3Q6QNY0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BLOC1S3Q6QNY0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms