Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TSPY13P-201ENST00000338964 914 ntBASIC21.21■□□□□ 0.99
RNF220Q5VTB9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF220Q5VTB9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
RNF220Q5VTB9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF220Q5VTB9 ANOS2P-203ENST00000472227 1816 ntBASIC21.2■□□□□ 0.98
RNF220Q5VTB9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF220Q5VTB9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF220Q5VTB9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RNF220Q5VTB9 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
RNF220Q5VTB9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF220Q5VTB9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 BHLHE23-202ENST00000612929 1109 ntBASIC21.18■□□□□ 0.98
RNF220Q5VTB9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.18■□□□□ 0.98
RNF220Q5VTB9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF220Q5VTB9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF220Q5VTB9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF220Q5VTB9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 AL022069.1-201ENST00000568025 1636 ntBASIC21.15■□□□□ 0.98
RNF220Q5VTB9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 AC026310.3-201ENST00000625186 2373 ntBASIC21.15■□□□□ 0.98
RNF220Q5VTB9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF220Q5VTB9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF220Q5VTB9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 PVT1_1.1-201ENST00000615125 194 ntBASIC21.14■□□□□ 0.97
RNF220Q5VTB9 AC012354.3-201ENST00000623734 483 ntBASIC21.14■□□□□ 0.97
RNF220Q5VTB9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF220Q5VTB9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms