Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.514e-9■■■■□ 24.1
DDX59Q5T1V6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.474e-9■■■■□ 24.1
DDX59Q5T1V6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.234e-9■■■■□ 24.1
DDX59Q5T1V6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.042e-17■■■■□ 24.1
DDX59Q5T1V6 ISOC2-206ENST00000589108 706 ntTSL 212.92□□□□□ -0.341e-6■■■■□ 24.1
DDX59Q5T1V6 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC11.42□□□□□ -0.584e-9■■■■□ 24.1
DDX59Q5T1V6 SMARCC2-209ENST00000550164 4114 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.824e-9■■■■□ 24.1
DDX59Q5T1V6 SMARCC2-214ENST00000552674 3730 ntTSL 29.23□□□□□ -0.934e-9■■■■□ 24.1
DDX59Q5T1V6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.36■□□□□ 0.534e-7■■■■□ 24.1
DDX59Q5T1V6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.96■□□□□ 0.314e-7■■■■□ 24.1
DDX59Q5T1V6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.76■□□□□ 0.274e-7■■■■□ 24.1
DDX59Q5T1V6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.024e-7■■■■□ 24.1
DDX59Q5T1V6 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.84e-7■■■■□ 24.1
DDX59Q5T1V6 SGSM2-207ENST00000573062 1335 ntTSL 225.31■■□□□ 1.643e-6■■■■□ 24.1
DDX59Q5T1V6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.43e-6■■■■□ 24.1
DDX59Q5T1V6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.383e-6■■■■□ 24.1
DDX59Q5T1V6 SGSM2-212ENST00000574650 242 ntTSL 313.82□□□□□ -0.23e-6■■■■□ 24.1
DDX59Q5T1V6 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC11.24□□□□□ -0.613e-6■■■■□ 24.1
DDX59Q5T1V6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.288e-7■■■■□ 24
DDX59Q5T1V6 COQ8A-209ENST00000489044 941 ntTSL 316.76■□□□□ 0.278e-7■■■■□ 24
DDX59Q5T1V6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.1■□□□□ 0.178e-7■■■■□ 24
DDX59Q5T1V6 COQ8A-205ENST00000478406 3612 ntTSL 214.14□□□□□ -0.158e-7■■■■□ 24
DDX59Q5T1V6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.158e-7■■■■□ 24
DDX59Q5T1V6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.791e-9■■■■□ 23.9
DDX59Q5T1V6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.16■□□□□ 0.341e-9■■■■□ 23.9
DDX59Q5T1V6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.15□□□□□ -0.141e-9■■■■□ 23.9
DDX59Q5T1V6 SLC1A5-206ENST00000598022 276 ntTSL 312.63□□□□□ -0.391e-9■■■■□ 23.9
DDX59Q5T1V6 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.53□□□□□ -0.41e-9■■■■□ 23.9
DDX59Q5T1V6 SLC1A5-204ENST00000593713 774 ntTSL 310.17□□□□□ -0.781e-9■■■■□ 23.9
DDX59Q5T1V6 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.698e-19■■■■□ 23.9
DDX59Q5T1V6 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.128e-19■■■■□ 23.9
DDX59Q5T1V6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.328e-19■■■■□ 23.9
DDX59Q5T1V6 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)4.88□□□□□ -1.638e-19■■■■□ 23.9
DDX59Q5T1V6 NEU4-207ENST00000420288 845 ntTSL 317.28■□□□□ 0.362e-9■■■■□ 23.9
DDX59Q5T1V6 NEU4-206ENST00000415936 860 ntTSL 316.22■□□□□ 0.192e-9■■■■□ 23.9
DDX59Q5T1V6 NEU4-208ENST00000423583 753 ntTSL 515.99■□□□□ 0.152e-9■■■■□ 23.9
DDX59Q5T1V6 NEU4-209ENST00000426032 676 ntTSL 314.33□□□□□ -0.122e-9■■■■□ 23.9
DDX59Q5T1V6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.089e-7■■■■□ 23.9
DDX59Q5T1V6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.939e-7■■■■□ 23.9
DDX59Q5T1V6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.929e-7■■■■□ 23.9
DDX59Q5T1V6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.189e-7■■■■□ 23.9
DDX59Q5T1V6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.451e-8■■■■□ 23.9
DDX59Q5T1V6 LTBP3-207ENST00000526927 2750 ntTSL 216.65■□□□□ 0.261e-8■■■■□ 23.9
DDX59Q5T1V6 FAAP20-212ENST00000476803 701 ntTSL 216.5■□□□□ 0.238e-7■■■■□ 23.9
DDX59Q5T1V6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.08■□□□□ 0.011e-23■■■■□ 23.8
DDX59Q5T1V6 SAMD4B-212ENST00000602243 672 ntTSL 321.78■■□□□ 1.089e-7■■■■□ 23.8
DDX59Q5T1V6 ACTN4-205ENST00000477174 544 ntTSL 312.14□□□□□ -0.472e-8■■■■□ 23.8
DDX59Q5T1V6 NEU4-211ENST00000435855 2281 ntTSL 220.71■□□□□ 0.917e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.87e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.787e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.74■□□□□ 0.757e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.77e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.597e-9■■■■□ 23.8
DDX59Q5T1V6 NEU4-217ENST00000618597 3013 ntTSL 218.44■□□□□ 0.547e-9■■■■□ 23.8
DDX59Q5T1V6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.092e-7■■■■□ 23.7
DDX59Q5T1V6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.142e-7■■■■□ 23.7
DDX59Q5T1V6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.272e-7■■■■□ 23.7
DDX59Q5T1V6 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.372e-7■■■■□ 23.7
DDX59Q5T1V6 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.822e-8■■■■□ 23.7
DDX59Q5T1V6 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-8■■■■□ 23.7
DDX59Q5T1V6 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.922e-8■■■■□ 23.7
DDX59Q5T1V6 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.738e-23■■■■□ 23.7
DDX59Q5T1V6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.348e-23■■■■□ 23.7
DDX59Q5T1V6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.05□□□□□ -0.164e-7■■■■□ 23.7
DDX59Q5T1V6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.264e-7■■■■□ 23.7
DDX59Q5T1V6 ABCC6-202ENST00000456970 4137 ntTSL 213.43□□□□□ -0.264e-7■■■■□ 23.7
DDX59Q5T1V6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.181e-6■■■■□ 23.7
DDX59Q5T1V6 DEAF1-207ENST00000527170 1623 ntTSL 1 (best)15.33■□□□□ 0.043e-8■■■■□ 23.6
DDX59Q5T1V6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.351e-6■■■■□ 23.5
DDX59Q5T1V6 UTRN-208ENST00000433557 354 ntTSL 420.08■□□□□ 0.812e-9■■■■□ 23.5
DDX59Q5T1V6 UTRN-206ENST00000421035 572 ntTSL 26.32□□□□□ -1.42e-9■■■■□ 23.5
DDX59Q5T1V6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.762e-9■■■■□ 23.5
DDX59Q5T1V6 UTRN-213ENST00000628146 597 ntTSL 23.66□□□□□ -1.822e-9■■■■□ 23.5
DDX59Q5T1V6 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.48□□□□□ -1.051e-6■■■■□ 23.5
DDX59Q5T1V6 ZNF107-202ENST00000360117 1061 ntTSL 1 (best)7.12□□□□□ -1.271e-6■■■■□ 23.5
DDX59Q5T1V6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.83□□□□□ -1.321e-6■■■■□ 23.5
DDX59Q5T1V6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.531e-6■■■■□ 23.5
DDX59Q5T1V6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.07□□□□□ -1.61e-6■■■■□ 23.5
DDX59Q5T1V6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.234e-7■■■■□ 23.5
DDX59Q5T1V6 MINK1-209ENST00000574453 4941 ntTSL 1 (best)15.8■□□□□ 0.124e-7■■■■□ 23.5
DDX59Q5T1V6 MINK1-204ENST00000571207 4569 ntTSL 514.91□□□□□ -0.024e-7■■■■□ 23.5
DDX59Q5T1V6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.024e-7■■■■□ 23.5
DDX59Q5T1V6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.391e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-203ENST00000553452 609 ntTSL 522.73■■□□□ 1.234e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.79■□□□□ 0.444e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.214e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.044e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.26□□□□□ -0.134e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-206ENST00000554999 667 ntTSL 512.86□□□□□ -0.354e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-209ENST00000556185 691 ntTSL 512.38□□□□□ -0.434e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-212ENST00000557309 770 ntTSL 312.03□□□□□ -0.484e-6■■■■□ 23.5
DDX59Q5T1V6 ITPK1-208ENST00000555553 727 ntTSL 38.57□□□□□ -1.044e-6■■■■□ 23.5
DDX59Q5T1V6 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.698e-7■■■■□ 23.4
DDX59Q5T1V6 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.828e-7■■■■□ 23.4
DDX59Q5T1V6 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.978e-7■■■■□ 23.4
DDX59Q5T1V6 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.053e-16■■■■□ 23.4
DDX59Q5T1V6 LPP-204ENST00000420410 535 ntTSL 317.34■□□□□ 0.379e-7■■■■□ 23.4
DDX59Q5T1V6 LPP-203ENST00000416784 612 ntTSL 38.59□□□□□ -1.039e-7■■■■□ 23.4
DDX59Q5T1V6 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.28□□□□□ -1.089e-7■■■■□ 23.4
DDX59Q5T1V6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.919e-7■■■■□ 23.4
Retrieved 100 of 7,289 protein–RNA pairs in 307.3 ms