Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
SNAPC4Q5SXM2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
SNAPC4Q5SXM2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
SNAPC4Q5SXM2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
SNAPC4Q5SXM2 AL138781.1-201ENST00000566567 1274 ntBASIC36.88■■■■□ 3.5
SNAPC4Q5SXM2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC36.88■■■■□ 3.5
SNAPC4Q5SXM2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC36.88■■■■□ 3.49
SNAPC4Q5SXM2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC36.88■■■■□ 3.49
SNAPC4Q5SXM2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
SNAPC4Q5SXM2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC36.88■■■■□ 3.49
SNAPC4Q5SXM2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
SNAPC4Q5SXM2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC36.87■■■■□ 3.49
SNAPC4Q5SXM2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC36.87■■■■□ 3.49
SNAPC4Q5SXM2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC36.87■■■■□ 3.49
SNAPC4Q5SXM2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC36.87■■■■□ 3.49
SNAPC4Q5SXM2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 AC069152.1-201ENST00000438030 544 ntBASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 MDK-213ENST00000617138 635 ntTSL 2 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC36.86■■■■□ 3.49
SNAPC4Q5SXM2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC36.85■■■■□ 3.49
SNAPC4Q5SXM2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
SNAPC4Q5SXM2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC36.83■■■■□ 3.49
SNAPC4Q5SXM2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC36.83■■■■□ 3.49
SNAPC4Q5SXM2 HLA-L-211ENST00000482052 1765 ntBASIC36.83■■■■□ 3.49
SNAPC4Q5SXM2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC36.83■■■■□ 3.49
SNAPC4Q5SXM2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
SNAPC4Q5SXM2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC36.82■■■■□ 3.49
SNAPC4Q5SXM2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC36.82■■■■□ 3.49
SNAPC4Q5SXM2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC36.82■■■■□ 3.49
SNAPC4Q5SXM2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC36.82■■■■□ 3.49
SNAPC4Q5SXM2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 AC008687.6-201ENST00000596318 630 ntBASIC36.82■■■■□ 3.48
SNAPC4Q5SXM2 AL121749.1-202ENST00000609313 2153 ntBASIC36.81■■■■□ 3.48
SNAPC4Q5SXM2 BX005040.4-201ENST00000637145 1518 ntBASIC36.81■■■■□ 3.48
SNAPC4Q5SXM2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC36.81■■■■□ 3.48
SNAPC4Q5SXM2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC36.81■■■■□ 3.48
SNAPC4Q5SXM2 AC098934.4-201ENST00000564127 592 ntBASIC36.81■■■■□ 3.48
SNAPC4Q5SXM2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
SNAPC4Q5SXM2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
SNAPC4Q5SXM2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
SNAPC4Q5SXM2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC36.79■■■■□ 3.48
SNAPC4Q5SXM2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
SNAPC4Q5SXM2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
SNAPC4Q5SXM2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
SNAPC4Q5SXM2 AC083906.2-201ENST00000511578 360 ntBASIC36.76■■■■□ 3.48
SNAPC4Q5SXM2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
SNAPC4Q5SXM2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
SNAPC4Q5SXM2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SNAPC4Q5SXM2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms