Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
EXOSC6Q5RKV6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXOSC6Q5RKV6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC6Q5RKV6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 AC087742.1-201ENST00000575880 1738 ntBASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 AC233723.2-201ENST00000623798 2106 ntBASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 AC127496.7-201ENST00000625110 1798 ntBASIC20.54■□□□□ 0.88
EXOSC6Q5RKV6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EXOSC6Q5RKV6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 AC006455.2-201ENST00000429931 906 ntBASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXOSC6Q5RKV6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.87
EXOSC6Q5RKV6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
EXOSC6Q5RKV6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
EXOSC6Q5RKV6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EXOSC6Q5RKV6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXOSC6Q5RKV6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXOSC6Q5RKV6 AL117328.2-201ENST00000624617 1940 ntBASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 AC099791.2-201ENST00000605725 427 ntBASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 MIR4466-201ENST00000606121 54 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms