Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.69■■■□□ 2.5
CDCA8Q53HL2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDCA8Q53HL2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.69■■■□□ 2.5
CDCA8Q53HL2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CDCA8Q53HL2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDCA8Q53HL2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDCA8Q53HL2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 DUSP8P3-201ENST00000399571 1760 ntBASIC30.67■■■□□ 2.5
CDCA8Q53HL2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDCA8Q53HL2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 IGHV3-19-201ENST00000521488 291 ntBASIC30.66■■■□□ 2.5
CDCA8Q53HL2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 AC068587.7-201ENST00000641602 218 ntBASIC30.66■■■□□ 2.5
CDCA8Q53HL2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.66■■■□□ 2.5
CDCA8Q53HL2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDCA8Q53HL2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDCA8Q53HL2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CDCA8Q53HL2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.64■■■□□ 2.5
CDCA8Q53HL2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.49
CDCA8Q53HL2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDCA8Q53HL2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
CDCA8Q53HL2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.61■■■□□ 2.49
CDCA8Q53HL2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDCA8Q53HL2 IRS3P-201ENST00000223076 1006 ntBASIC30.61■■■□□ 2.49
CDCA8Q53HL2 TSPY26P-201ENST00000476365 1326 ntBASIC30.61■■■□□ 2.49
CDCA8Q53HL2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDCA8Q53HL2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDCA8Q53HL2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.6■■■□□ 2.49
CDCA8Q53HL2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.6■■■□□ 2.49
CDCA8Q53HL2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.6■■■□□ 2.49
CDCA8Q53HL2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.6■■■□□ 2.49
CDCA8Q53HL2 AL031602.1-201ENST00000633169 911 ntBASIC30.6■■■□□ 2.49
CDCA8Q53HL2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
CDCA8Q53HL2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms