Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.99□□□□□ -0.17
HSPG2P98160 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.99□□□□□ -0.17
HSPG2P98160 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.99□□□□□ -0.17
HSPG2P98160 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.99□□□□□ -0.17
HSPG2P98160 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HSPG2P98160 CD37-213ENST00000598095 1598 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HSPG2P98160 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HSPG2P98160 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HSPG2P98160 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HSPG2P98160 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.98□□□□□ -0.17
HSPG2P98160 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.98□□□□□ -0.17
HSPG2P98160 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.98□□□□□ -0.17
HSPG2P98160 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HSPG2P98160 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HSPG2P98160 SLC29A4P1-201ENST00000398760 971 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.97□□□□□ -0.17
HSPG2P98160 AC008550.1-201ENST00000511500 884 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.97□□□□□ -0.17
HSPG2P98160 AC105036.2-201ENST00000569468 176 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC13.97□□□□□ -0.17
HSPG2P98160 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 ECEL1P3-201ENST00000427961 737 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.97□□□□□ -0.17
HSPG2P98160 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.97□□□□□ -0.17
HSPG2P98160 SLC6A10P-202ENST00000431994 2058 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HSPG2P98160 AC010501.1-201ENST00000606270 1962 ntBASIC13.97□□□□□ -0.17
HSPG2P98160 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.97□□□□□ -0.17
HSPG2P98160 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.97□□□□□ -0.17
HSPG2P98160 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.97□□□□□ -0.17
HSPG2P98160 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HSPG2P98160 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HSPG2P98160 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.96□□□□□ -0.17
HSPG2P98160 AF201337.1-201ENST00000520239 748 ntBASIC13.96□□□□□ -0.17
HSPG2P98160 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HSPG2P98160 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.96□□□□□ -0.17
HSPG2P98160 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.96□□□□□ -0.17
HSPG2P98160 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC13.96□□□□□ -0.17
HSPG2P98160 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC13.96□□□□□ -0.17
HSPG2P98160 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HSPG2P98160 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HSPG2P98160 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HSPG2P98160 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HSPG2P98160 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.96□□□□□ -0.18
HSPG2P98160 AC128676.1-201ENST00000454392 318 ntBASIC13.96□□□□□ -0.18
HSPG2P98160 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HSPG2P98160 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HSPG2P98160 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HSPG2P98160 ST7-205ENST00000393446 2114 ntTSL 5 BASIC13.96□□□□□ -0.18
HSPG2P98160 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.95□□□□□ -0.18
HSPG2P98160 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HSPG2P98160 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.95□□□□□ -0.18
HSPG2P98160 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
HSPG2P98160 BX005040.4-201ENST00000637145 1518 ntBASIC13.95□□□□□ -0.18
HSPG2P98160 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HSPG2P98160 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HSPG2P98160 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HSPG2P98160 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.94□□□□□ -0.18
HSPG2P98160 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HSPG2P98160 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.94□□□□□ -0.18
HSPG2P98160 MIR1224-201ENST00000408193 85 ntBASIC13.94□□□□□ -0.18
HSPG2P98160 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.94□□□□□ -0.18
HSPG2P98160 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.94□□□□□ -0.18
HSPG2P98160 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HSPG2P98160 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.94□□□□□ -0.18
HSPG2P98160 SHF-208ENST00000560734 1731 ntTSL 3 BASIC13.94□□□□□ -0.18
HSPG2P98160 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HSPG2P98160 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HSPG2P98160 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.94□□□□□ -0.18
HSPG2P98160 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms