Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.87■□□□□ 0.93
RPP38P78345 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.87■□□□□ 0.93
RPP38P78345 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPP38P78345 AC127496.7-201ENST00000625110 1798 ntBASIC20.87■□□□□ 0.93
RPP38P78345 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPP38P78345 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RPP38P78345 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.86■□□□□ 0.93
RPP38P78345 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 ECEL1P1-201ENST00000373592 1742 ntBASIC20.86■□□□□ 0.93
RPP38P78345 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RPP38P78345 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPP38P78345 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.86■□□□□ 0.93
RPP38P78345 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.85■□□□□ 0.93
RPP38P78345 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.85■□□□□ 0.93
RPP38P78345 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.85■□□□□ 0.93
RPP38P78345 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.85■□□□□ 0.93
RPP38P78345 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
RPP38P78345 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.85■□□□□ 0.93
RPP38P78345 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPP38P78345 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPP38P78345 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPP38P78345 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPP38P78345 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.84■□□□□ 0.93
RPP38P78345 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
RPP38P78345 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
RPP38P78345 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.84■□□□□ 0.93
RPP38P78345 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
RPP38P78345 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPP38P78345 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPP38P78345 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.84■□□□□ 0.93
RPP38P78345 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPP38P78345 AC137767.1-201ENST00000602918 1920 ntBASIC20.84■□□□□ 0.93
RPP38P78345 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
RPP38P78345 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPP38P78345 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPP38P78345 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.83■□□□□ 0.93
RPP38P78345 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPP38P78345 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPP38P78345 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.83■□□□□ 0.93
RPP38P78345 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPP38P78345 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.83■□□□□ 0.92
RPP38P78345 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPP38P78345 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPP38P78345 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPP38P78345 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPP38P78345 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
RPP38P78345 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
RPP38P78345 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPP38P78345 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.82■□□□□ 0.92
RPP38P78345 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.82■□□□□ 0.92
RPP38P78345 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPP38P78345 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPP38P78345 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPP38P78345 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPP38P78345 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPP38P78345 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.8■□□□□ 0.92
RPP38P78345 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP38P78345 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP38P78345 AC131281.2-201ENST00000520478 145 ntBASIC20.8■□□□□ 0.92
RPP38P78345 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP38P78345 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RPP38P78345 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms