Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDC42P60953 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42P60953 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42P60953 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CDC42P60953 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42P60953 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDC42P60953 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CDC42P60953 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
CDC42P60953 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 DUX4L9-201ENST00000449051 1259 ntBASIC20.2■□□□□ 0.82
CDC42P60953 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDC42P60953 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.2■□□□□ 0.82
CDC42P60953 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42P60953 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDC42P60953 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42P60953 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42P60953 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDC42P60953 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42P60953 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42P60953 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42P60953 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42P60953 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42P60953 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42P60953 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDC42P60953 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC42P60953 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42P60953 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42P60953 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.18■□□□□ 0.82
CDC42P60953 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42P60953 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42P60953 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC42P60953 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDC42P60953 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42P60953 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC42P60953 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC42P60953 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC42P60953 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42P60953 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDC42P60953 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42P60953 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42P60953 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42P60953 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42P60953 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
CDC42P60953 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42P60953 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42P60953 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 AC022616.5-201ENST00000518796 181 ntBASIC20.16■□□□□ 0.82
CDC42P60953 RNF126P1-201ENST00000567452 1320 ntBASIC20.16■□□□□ 0.82
CDC42P60953 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC42P60953 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDC42P60953 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42P60953 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42P60953 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42P60953 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDC42P60953 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC42P60953 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC42P60953 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC42P60953 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC42P60953 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42P60953 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDC42P60953 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDC42P60953 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDC42P60953 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42P60953 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDC42P60953 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC42P60953 AC087742.1-201ENST00000575880 1738 ntBASIC20.14■□□□□ 0.81
CDC42P60953 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42P60953 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.14■□□□□ 0.81
CDC42P60953 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDC42P60953 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDC42P60953 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42P60953 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42P60953 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC42P60953 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
CDC42P60953 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42P60953 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms