Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
FOXG1P55316 AC142381.2-201ENST00000566120 298 ntBASIC19.49■□□□□ 0.71
FOXG1P55316 AC008764.7-201ENST00000593779 1081 ntBASIC19.49■□□□□ 0.71
FOXG1P55316 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 AC019069.1-201ENST00000610008 1333 ntBASIC19.49■□□□□ 0.71
FOXG1P55316 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXG1P55316 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXG1P55316 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
FOXG1P55316 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXG1P55316 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXG1P55316 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXG1P55316 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXG1P55316 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.48■□□□□ 0.71
FOXG1P55316 SLC47A1P1-202ENST00000449666 945 ntBASIC19.48■□□□□ 0.71
FOXG1P55316 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FOXG1P55316 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXG1P55316 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXG1P55316 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
FOXG1P55316 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXG1P55316 C9orf163-202ENST00000624034 2573 ntBASIC19.47■□□□□ 0.71
FOXG1P55316 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXG1P55316 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXG1P55316 MIR939-201ENST00000401314 82 ntBASIC19.47■□□□□ 0.71
FOXG1P55316 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXG1P55316 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXG1P55316 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXG1P55316 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXG1P55316 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXG1P55316 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXG1P55316 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXG1P55316 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXG1P55316 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FOXG1P55316 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXG1P55316 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXG1P55316 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FOXG1P55316 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXG1P55316 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXG1P55316 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXG1P55316 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXG1P55316 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXG1P55316 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXG1P55316 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FOXG1P55316 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXG1P55316 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXG1P55316 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXG1P55316 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXG1P55316 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXG1P55316 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXG1P55316 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXG1P55316 AC099791.1-201ENST00000416440 715 ntBASIC19.44■□□□□ 0.7
FOXG1P55316 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FOXG1P55316 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXG1P55316 DUSP8P5-201ENST00000422884 1815 ntBASIC19.44■□□□□ 0.7
FOXG1P55316 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
FOXG1P55316 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXG1P55316 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXG1P55316 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXG1P55316 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXG1P55316 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXG1P55316 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXG1P55316 BX842568.3-201ENST00000418104 571 ntBASIC19.43■□□□□ 0.7
FOXG1P55316 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXG1P55316 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXG1P55316 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXG1P55316 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXG1P55316 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
FOXG1P55316 AC233992.3-201ENST00000607491 485 ntBASIC19.42■□□□□ 0.7
FOXG1P55316 CA15P2-201ENST00000611168 834 ntBASIC19.42■□□□□ 0.7
FOXG1P55316 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXG1P55316 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms