Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.39■■□□□ 1.02
EPHA4P54764 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.39■■□□□ 1.02
EPHA4P54764 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EPHA4P54764 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.39■■□□□ 1.01
EPHA4P54764 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.39■■□□□ 1.01
EPHA4P54764 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
EPHA4P54764 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.39■■□□□ 1.01
EPHA4P54764 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.39■■□□□ 1.01
EPHA4P54764 AC087623.3-201ENST00000607047 1098 ntBASIC21.39■■□□□ 1.01
EPHA4P54764 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.39■■□□□ 1.01
EPHA4P54764 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.39■■□□□ 1.01
EPHA4P54764 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.39■■□□□ 1.01
EPHA4P54764 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
EPHA4P54764 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EPHA4P54764 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.39■■□□□ 1.01
EPHA4P54764 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.39■■□□□ 1.01
EPHA4P54764 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.38■■□□□ 1.01
EPHA4P54764 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
EPHA4P54764 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
EPHA4P54764 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EPHA4P54764 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
EPHA4P54764 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.38■■□□□ 1.01
EPHA4P54764 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.38■■□□□ 1.01
EPHA4P54764 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EPHA4P54764 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.38■■□□□ 1.01
EPHA4P54764 AL354811.1-201ENST00000610286 706 ntBASIC21.38■■□□□ 1.01
EPHA4P54764 ABCB10P4-201ENST00000566803 2184 ntBASIC21.38■■□□□ 1.01
EPHA4P54764 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EPHA4P54764 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EPHA4P54764 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
EPHA4P54764 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
EPHA4P54764 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.37■■□□□ 1.01
EPHA4P54764 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
EPHA4P54764 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EPHA4P54764 AC027612.3-201ENST00000413684 1047 ntBASIC21.37■■□□□ 1.01
EPHA4P54764 YBX1P1-201ENST00000445822 960 ntBASIC21.37■■□□□ 1.01
EPHA4P54764 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EPHA4P54764 AC012414.1-201ENST00000556676 535 ntBASIC21.37■■□□□ 1.01
EPHA4P54764 AC104564.3-201ENST00000582367 638 ntBASIC21.37■■□□□ 1.01
EPHA4P54764 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
EPHA4P54764 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.36■■□□□ 1.01
EPHA4P54764 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.36■■□□□ 1.01
EPHA4P54764 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.36■■□□□ 1.01
EPHA4P54764 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.36■■□□□ 1.01
EPHA4P54764 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EPHA4P54764 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EPHA4P54764 AL353803.4-201ENST00000565882 1934 ntBASIC21.35■■□□□ 1.01
EPHA4P54764 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.35■■□□□ 1.01
EPHA4P54764 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.35■■□□□ 1.01
EPHA4P54764 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.35■■□□□ 1.01
EPHA4P54764 AC068587.7-201ENST00000641602 218 ntBASIC21.35■■□□□ 1.01
EPHA4P54764 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EPHA4P54764 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
EPHA4P54764 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.34■■□□□ 1.01
EPHA4P54764 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EPHA4P54764 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.33■■□□□ 1.01
EPHA4P54764 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
EPHA4P54764 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
EPHA4P54764 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.33■■□□□ 1.01
EPHA4P54764 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.33■■□□□ 1.01
EPHA4P54764 AC123595.1-201ENST00000440769 1046 ntBASIC21.33■■□□□ 1.01
EPHA4P54764 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.33■■□□□ 1.01
EPHA4P54764 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.33■■□□□ 1.01
EPHA4P54764 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.33■■□□□ 1.01
EPHA4P54764 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EPHA4P54764 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
EPHA4P54764 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
EPHA4P54764 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EPHA4P54764 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
EPHA4P54764 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.32■■□□□ 1
EPHA4P54764 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.32■■□□□ 1
EPHA4P54764 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms