Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC34P49427 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDC34P49427 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDC34P49427 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC34P49427 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC34P49427 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC34P49427 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC34P49427 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC34P49427 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC34P49427 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDC34P49427 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC34P49427 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.45■□□□□ 0.38
CDC34P49427 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
CDC34P49427 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC34P49427 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.45■□□□□ 0.38
CDC34P49427 AC080038.3-201ENST00000623346 1952 ntBASIC17.45■□□□□ 0.38
CDC34P49427 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDC34P49427 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC34P49427 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC34P49427 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDC34P49427 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC34P49427 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDC34P49427 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC34P49427 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC34P49427 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC34P49427 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC34P49427 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC34P49427 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.43■□□□□ 0.38
CDC34P49427 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.43■□□□□ 0.38
CDC34P49427 AC022413.1-201ENST00000624602 984 ntBASIC17.43■□□□□ 0.38
CDC34P49427 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.43■□□□□ 0.38
CDC34P49427 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.43■□□□□ 0.38
CDC34P49427 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CDC34P49427 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC34P49427 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.43■□□□□ 0.38
CDC34P49427 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 AC131274.2-201ENST00000580697 1507 ntBASIC17.42■□□□□ 0.38
CDC34P49427 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 RPS2P7-201ENST00000447334 885 ntBASIC17.42■□□□□ 0.38
CDC34P49427 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC34P49427 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC34P49427 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC34P49427 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC34P49427 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC34P49427 AC026310.3-201ENST00000625186 2373 ntBASIC17.42■□□□□ 0.38
CDC34P49427 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC34P49427 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC34P49427 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CDC34P49427 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC34P49427 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC34P49427 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDC34P49427 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC34P49427 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDC34P49427 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC34P49427 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC34P49427 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.41■□□□□ 0.38
CDC34P49427 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.41■□□□□ 0.38
CDC34P49427 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CDC34P49427 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDC34P49427 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC34P49427 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDC34P49427 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDC34P49427 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDC34P49427 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC34P49427 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms