Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21■□□□□ 0.95
RPL3P39023 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPL3P39023 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPL3P39023 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
RPL3P39023 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.99■□□□□ 0.95
RPL3P39023 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.99■□□□□ 0.95
RPL3P39023 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 AC009102.2-201ENST00000606772 1639 ntBASIC20.99■□□□□ 0.95
RPL3P39023 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPL3P39023 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RPL3P39023 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.98■□□□□ 0.95
RPL3P39023 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
RPL3P39023 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPL3P39023 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL3P39023 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL3P39023 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.97■□□□□ 0.95
RPL3P39023 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.97■□□□□ 0.95
RPL3P39023 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.97■□□□□ 0.95
RPL3P39023 TSPY9P-201ENST00000440215 945 ntBASIC20.97■□□□□ 0.95
RPL3P39023 TSPY11P-201ENST00000442607 1045 ntBASIC20.97■□□□□ 0.95
RPL3P39023 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL3P39023 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPL3P39023 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RPL3P39023 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
RPL3P39023 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPL3P39023 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL3P39023 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPL3P39023 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.96■□□□□ 0.95
RPL3P39023 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPL3P39023 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RPL3P39023 PKD1P6-201ENST00000343738 4769 ntBASIC20.96■□□□□ 0.95
RPL3P39023 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPL3P39023 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPL3P39023 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 AL451085.2-201ENST00000605085 799 ntBASIC20.95■□□□□ 0.94
RPL3P39023 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.95■□□□□ 0.94
RPL3P39023 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RPL3P39023 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPL3P39023 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPL3P39023 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.95■□□□□ 0.94
RPL3P39023 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RPL3P39023 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.94■□□□□ 0.94
RPL3P39023 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPL3P39023 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.94■□□□□ 0.94
RPL3P39023 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.94■□□□□ 0.94
RPL3P39023 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPL3P39023 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
RPL3P39023 MIR6724-1-201ENST00000616420 92 ntBASIC20.94■□□□□ 0.94
RPL3P39023 MIR6724-2-201ENST00000616483 92 ntBASIC20.94■□□□□ 0.94
RPL3P39023 MIR6724-4-201ENST00000617390 92 ntBASIC20.94■□□□□ 0.94
RPL3P39023 MIR6724-3-201ENST00000622482 92 ntBASIC20.94■□□□□ 0.94
RPL3P39023 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 EP400NL-214ENST00000641289 2402 ntBASIC20.94■□□□□ 0.94
RPL3P39023 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPL3P39023 C17orf82-201ENST00000623772 1530 ntBASIC20.94■□□□□ 0.94
RPL3P39023 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPL3P39023 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPL3P39023 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPL3P39023 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPL3P39023 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPL3P39023 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPL3P39023 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPL3P39023 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
RPL3P39023 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.92■□□□□ 0.94
RPL3P39023 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.92■□□□□ 0.94
RPL3P39023 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
RPL3P39023 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.92■□□□□ 0.94
RPL3P39023 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPL3P39023 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms