Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 SET5YHR207C 1581 nt5.71□□□□□ -1.49
SSN2P38931 ASN1YPR145W 1719 nt5.71□□□□□ -1.49
SSN2P38931 TPM1YNL079C 600 nt5.71□□□□□ -1.5
SSN2P38931 EHD3YDR036C 1503 nt5.71□□□□□ -1.5
SSN2P38931 ALR2YFL050C 2577 nt5.7□□□□□ -1.5
SSN2P38931 YTM1YOR272W 1383 nt5.7□□□□□ -1.5
SSN2P38931 YGL074CYGL074C 327 nt5.7□□□□□ -1.5
SSN2P38931 PAN5YHR063C 1140 nt5.7□□□□□ -1.5
SSN2P38931 COX23YHR116W 456 nt5.7□□□□□ -1.5
SSN2P38931 YHR180WYHR180W 492 nt5.7□□□□□ -1.5
SSN2P38931 GOT1YMR292W 417 nt5.7□□□□□ -1.5
SSN2P38931 FDH2YPL275W 711 nt5.7□□□□□ -1.5
SSN2P38931 POL3YDL102W 3294 nt5.7□□□□□ -1.5
SSN2P38931 DSF2YBR007C 2211 nt5.7□□□□□ -1.5
SSN2P38931 ATG2YNL242W 4779 nt5.69□□□□□ -1.5
SSN2P38931 PTM1YKL039W 1572 nt5.69□□□□□ -1.5
SSN2P38931 THR4YCR053W 1545 nt5.69□□□□□ -1.5
SSN2P38931 YMR317WYMR317W 3423 nt5.69□□□□□ -1.5
SSN2P38931 GCN5YGR252W 1320 nt5.69□□□□□ -1.5
SSN2P38931 AIR1YIL079C 1083 nt5.69□□□□□ -1.5
SSN2P38931 YLR012CYLR012C 300 nt5.69□□□□□ -1.5
SSN2P38931 WRS1YOL097C 1299 nt5.69□□□□□ -1.5
SSN2P38931 PCA1YBR295W 3651 nt5.69□□□□□ -1.5
SSN2P38931 YNL247WYNL247W 2304 nt5.69□□□□□ -1.5
SSN2P38931 UBP10YNL186W 2379 nt5.68□□□□□ -1.5
SSN2P38931 MTR4YJL050W 3222 nt5.68□□□□□ -1.5
SSN2P38931 JIP5YPR169W 1479 nt5.68□□□□□ -1.5
SSN2P38931 YGR107WYGR107W 450 nt5.67□□□□□ -1.5
SSN2P38931 SEN1YLR430W 6696 nt5.67□□□□□ -1.5
SSN2P38931 GPI18YBR004C 1302 nt5.67□□□□□ -1.5
SSN2P38931 ECM21YBL101C 3354 nt5.67□□□□□ -1.5
SSN2P38931 YHL026CYHL026C 948 nt5.66□□□□□ -1.5
SSN2P38931 MRPL16YBL038W 699 nt5.66□□□□□ -1.5
SSN2P38931 YOR073W-AYOR073W-A 234 nt5.66□□□□□ -1.5
SSN2P38931 TGS1YPL157W 948 nt5.66□□□□□ -1.5
SSN2P38931 PAP2YOL115W 1755 nt5.66□□□□□ -1.5
SSN2P38931 YGR018CYGR018C 330 nt5.65□□□□□ -1.5
SSN2P38931 SOD1YJR104C 465 nt5.65□□□□□ -1.5
SSN2P38931 YNL320WYNL320W 855 nt5.65□□□□□ -1.5
SSN2P38931 SLN1YIL147C 3663 nt5.65□□□□□ -1.5
SSN2P38931 NOP4YPL043W 2058 nt5.65□□□□□ -1.5
SSN2P38931 TRP4YDR354W 1143 nt5.65□□□□□ -1.51
SSN2P38931 RIM9YMR063W 720 nt5.65□□□□□ -1.51
SSN2P38931 NIS1YNL078W 1224 nt5.65□□□□□ -1.51
SSN2P38931 RAI1YGL246C 1164 nt5.64□□□□□ -1.51
SSN2P38931 RHO3YIL118W 696 nt5.64□□□□□ -1.51
SSN2P38931 YAL004WYAL004W 648 nt5.64□□□□□ -1.51
SSN2P38931 CAT5YOR125C 702 nt5.64□□□□□ -1.51
SSN2P38931 SMC3YJL074C 3693 nt5.63□□□□□ -1.51
SSN2P38931 BLM10YFL007W 6432 nt5.63□□□□□ -1.51
SSN2P38931 RPN2YIL075C 2838 nt5.63□□□□□ -1.51
SSN2P38931 CDC14YFR028C 1656 nt5.63□□□□□ -1.51
SSN2P38931 PRP28YDR243C 1767 nt5.63□□□□□ -1.51
SSN2P38931 RPL30YGL030W 318 nt5.63□□□□□ -1.51
SSN2P38931 tQ(UUG)BtQ(UUG)B 72 nt5.63□□□□□ -1.51
SSN2P38931 SLI1YGR212W 1407 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)DtK(UUU)D 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)G1tK(UUU)G1 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)G2tK(UUU)G2 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)KtK(UUU)K 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)LtK(UUU)L 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)OtK(UUU)O 73 nt5.62□□□□□ -1.51
SSN2P38931 tK(UUU)PtK(UUU)P 73 nt5.62□□□□□ -1.51
SSN2P38931 ENT3YJR125C 1227 nt5.62□□□□□ -1.51
SSN2P38931 SDO1YLR022C 753 nt5.62□□□□□ -1.51
SSN2P38931 VPS21YOR089C 633 nt5.62□□□□□ -1.51
SSN2P38931 ALA1YOR335C 2877 nt5.62□□□□□ -1.51
SSN2P38931 YER084WYER084W 387 nt5.61□□□□□ -1.51
SSN2P38931 MRP13YGR084C 1020 nt5.61□□□□□ -1.51
SSN2P38931 TAH18YPR048W 1872 nt5.61□□□□□ -1.51
SSN2P38931 TRM1YDR120C 1713 nt5.61□□□□□ -1.51
SSN2P38931 SKP2YNL311C 2292 nt5.61□□□□□ -1.51
SSN2P38931 ZDS1YMR273C 2748 nt5.61□□□□□ -1.51
SSN2P38931 ASI1YMR119W 1875 nt5.6□□□□□ -1.51
SSN2P38931 DNM1YLL001W 2274 nt5.6□□□□□ -1.51
SSN2P38931 CKA2YOR061W 1020 nt5.6□□□□□ -1.51
SSN2P38931 ATP4YPL078C 735 nt5.6□□□□□ -1.51
SSN2P38931 NOP7YGR103W 1818 nt5.6□□□□□ -1.51
SSN2P38931 SLD2YKL108W 1362 nt5.6□□□□□ -1.51
SSN2P38931 PHM8YER037W 966 nt5.59□□□□□ -1.51
SSN2P38931 GRE1YPL223C 507 nt5.59□□□□□ -1.51
SSN2P38931 YOR022CYOR022C 2148 nt5.59□□□□□ -1.51
SSN2P38931 APA2YDR530C 978 nt5.58□□□□□ -1.52
SSN2P38931 PSF3YOL146W 585 nt5.58□□□□□ -1.52
SSN2P38931 PNG1YPL096W 1092 nt5.58□□□□□ -1.52
SSN2P38931 CBP3YPL215W 1008 nt5.58□□□□□ -1.52
SSN2P38931 PDR12YPL058C 4536 nt5.58□□□□□ -1.52
SSN2P38931 ECT1YGR007W 972 nt5.57□□□□□ -1.52
SSN2P38931 SKI6YGR195W 741 nt5.57□□□□□ -1.52
SSN2P38931 ARO9YHR137W 1542 nt5.57□□□□□ -1.52
SSN2P38931 SNF2YOR290C 5112 nt5.57□□□□□ -1.52
SSN2P38931 HOM3YER052C 1584 nt5.57□□□□□ -1.52
SSN2P38931 RAD53YPL153C 2466 nt5.57□□□□□ -1.52
SSN2P38931 TMN2YDR107C 2019 nt5.57□□□□□ -1.52
SSN2P38931 tF(GAA)DtF(GAA)D 73 nt5.57□□□□□ -1.52
SSN2P38931 tF(GAA)NtF(GAA)N 73 nt5.57□□□□□ -1.52
SSN2P38931 DAM1YGR113W 1032 nt5.57□□□□□ -1.52
SSN2P38931 REE1YJL217W 597 nt5.57□□□□□ -1.52
SSN2P38931 MAK16YAL025C 921 nt5.57□□□□□ -1.52
SSN2P38931 YPR108W-AYPR108W-A 213 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms