Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS4P35443 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.43■□□□□ 0.7
THBS4P35443 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS4P35443 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THBS4P35443 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
THBS4P35443 AC233723.2-201ENST00000623798 2106 ntBASIC19.43■□□□□ 0.7
THBS4P35443 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.43■□□□□ 0.7
THBS4P35443 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
THBS4P35443 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.42■□□□□ 0.7
THBS4P35443 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
THBS4P35443 C17orf82-201ENST00000623772 1530 ntBASIC19.42■□□□□ 0.7
THBS4P35443 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 UNC93B3-201ENST00000308076 687 ntBASIC19.42■□□□□ 0.7
THBS4P35443 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
THBS4P35443 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
THBS4P35443 AC079630.1-202ENST00000618127 1840 ntBASIC19.41■□□□□ 0.7
THBS4P35443 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS4P35443 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS4P35443 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 AC099791.2-201ENST00000605725 427 ntBASIC19.41■□□□□ 0.7
THBS4P35443 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.41■□□□□ 0.7
THBS4P35443 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.41■□□□□ 0.7
THBS4P35443 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS4P35443 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS4P35443 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
THBS4P35443 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
THBS4P35443 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.4■□□□□ 0.7
THBS4P35443 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.4■□□□□ 0.7
THBS4P35443 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
THBS4P35443 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.4■□□□□ 0.7
THBS4P35443 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
THBS4P35443 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 C1orf229-201ENST00000623686 2258 ntBASIC19.4■□□□□ 0.7
THBS4P35443 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS4P35443 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS4P35443 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
THBS4P35443 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
THBS4P35443 MIR638-201ENST00000385237 100 ntBASIC19.39■□□□□ 0.69
THBS4P35443 PBX2P1-201ENST00000493219 1291 ntBASIC19.39■□□□□ 0.69
THBS4P35443 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.39■□□□□ 0.69
THBS4P35443 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
THBS4P35443 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS4P35443 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.38■□□□□ 0.69
THBS4P35443 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS4P35443 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS4P35443 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS4P35443 DUX4L19-201ENST00000557448 1267 ntBASIC19.38■□□□□ 0.69
THBS4P35443 AL136162.1-201ENST00000607711 1078 ntBASIC19.38■□□□□ 0.69
THBS4P35443 AC092171.4-201ENST00000609130 632 ntBASIC19.38■□□□□ 0.69
THBS4P35443 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
THBS4P35443 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.37■□□□□ 0.69
THBS4P35443 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.37■□□□□ 0.69
THBS4P35443 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.37■□□□□ 0.69
THBS4P35443 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS4P35443 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS4P35443 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS4P35443 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
THBS4P35443 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS4P35443 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
THBS4P35443 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms