Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HTR1EP28566 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
HTR1EP28566 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HTR1EP28566 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.18■□□□□ 0.98
HTR1EP28566 AC131281.2-201ENST00000520478 145 ntBASIC21.18■□□□□ 0.98
HTR1EP28566 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.18■□□□□ 0.98
HTR1EP28566 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.18■□□□□ 0.98
HTR1EP28566 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.18■□□□□ 0.98
HTR1EP28566 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HTR1EP28566 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.17■□□□□ 0.98
HTR1EP28566 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.17■□□□□ 0.98
HTR1EP28566 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.17■□□□□ 0.98
HTR1EP28566 AL136116.3-201ENST00000402907 1138 ntBASIC21.17■□□□□ 0.98
HTR1EP28566 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 AC079630.1-202ENST00000618127 1840 ntBASIC21.17■□□□□ 0.98
HTR1EP28566 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HTR1EP28566 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.17■□□□□ 0.98
HTR1EP28566 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HTR1EP28566 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.16■□□□□ 0.98
HTR1EP28566 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTR1EP28566 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTR1EP28566 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
HTR1EP28566 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HTR1EP28566 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTR1EP28566 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTR1EP28566 AC092028.1-203ENST00000608262 953 ntBASIC21.16■□□□□ 0.98
HTR1EP28566 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTR1EP28566 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.16■□□□□ 0.98
HTR1EP28566 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.15■□□□□ 0.98
HTR1EP28566 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.15■□□□□ 0.98
HTR1EP28566 AC120024.1-201ENST00000562672 995 ntBASIC21.15■□□□□ 0.98
HTR1EP28566 AC011551.1-201ENST00000614101 683 ntBASIC21.15■□□□□ 0.98
HTR1EP28566 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.15■□□□□ 0.98
HTR1EP28566 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HTR1EP28566 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTR1EP28566 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.14■□□□□ 0.98
HTR1EP28566 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.14■□□□□ 0.98
HTR1EP28566 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HTR1EP28566 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HTR1EP28566 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.14■□□□□ 0.98
HTR1EP28566 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HTR1EP28566 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.14■□□□□ 0.97
HTR1EP28566 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.14■□□□□ 0.97
HTR1EP28566 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.14■□□□□ 0.97
HTR1EP28566 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTR1EP28566 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTR1EP28566 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
HTR1EP28566 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HTR1EP28566 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.13■□□□□ 0.97
HTR1EP28566 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HTR1EP28566 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.13■□□□□ 0.97
HTR1EP28566 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HTR1EP28566 AC139530.1-201ENST00000575312 1977 ntBASIC21.13■□□□□ 0.97
HTR1EP28566 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
HTR1EP28566 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTR1EP28566 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
HTR1EP28566 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HTR1EP28566 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HTR1EP28566 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HTR1EP28566 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.12■□□□□ 0.97
HTR1EP28566 AC092053.2-201ENST00000640557 1818 ntBASIC21.12■□□□□ 0.97
HTR1EP28566 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HTR1EP28566 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTR1EP28566 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HTR1EP28566 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.11■□□□□ 0.97
HTR1EP28566 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTR1EP28566 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms