Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL11A2P13942 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL11A2P13942 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.61■■■□□ 2.01
COL11A2P13942 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.61■■■□□ 2.01
COL11A2P13942 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.6■■■□□ 2.01
COL11A2P13942 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 AC006970.2-201ENST00000450065 779 ntBASIC27.6■■■□□ 2.01
COL11A2P13942 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.6■■■□□ 2.01
COL11A2P13942 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.6■■■□□ 2.01
COL11A2P13942 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
COL11A2P13942 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL11A2P13942 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL11A2P13942 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL11A2P13942 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
COL11A2P13942 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.58■■■□□ 2.01
COL11A2P13942 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.58■■■□□ 2.01
COL11A2P13942 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL11A2P13942 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.58■■■□□ 2.01
COL11A2P13942 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL11A2P13942 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.58■■■□□ 2.01
COL11A2P13942 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
COL11A2P13942 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COL11A2P13942 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.58■■■□□ 2.01
COL11A2P13942 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.58■■■□□ 2.01
COL11A2P13942 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.58■■■□□ 2.01
COL11A2P13942 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL11A2P13942 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.57■■■□□ 2
COL11A2P13942 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL11A2P13942 AL109923.1-201ENST00000618799 583 ntBASIC27.57■■■□□ 2
COL11A2P13942 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL11A2P13942 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.57■■■□□ 2
COL11A2P13942 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL11A2P13942 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL11A2P13942 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.56■■■□□ 2
COL11A2P13942 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.56■■■□□ 2
COL11A2P13942 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.56■■■□□ 2
COL11A2P13942 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL11A2P13942 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.56■■■□□ 2
COL11A2P13942 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL11A2P13942 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.56■■■□□ 2
COL11A2P13942 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.56■■■□□ 2
COL11A2P13942 NCF1B-203ENST00000435988 1254 ntBASIC27.55■■■□□ 2
COL11A2P13942 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.55■■■□□ 2
COL11A2P13942 AL050303.2-201ENST00000619798 666 ntBASIC27.55■■■□□ 2
COL11A2P13942 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.55■■■□□ 2
COL11A2P13942 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
COL11A2P13942 ESRRAP2-201ENST00000418437 1549 ntBASIC27.55■■■□□ 2
COL11A2P13942 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.55■■■□□ 2
COL11A2P13942 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.55■■■□□ 2
COL11A2P13942 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.55■■■□□ 2
COL11A2P13942 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.54■■■□□ 2
COL11A2P13942 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.54■■■□□ 2
COL11A2P13942 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL11A2P13942 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.54■■■□□ 2
COL11A2P13942 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.54■■■□□ 2
COL11A2P13942 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.54■■■□□ 2
COL11A2P13942 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.54■■■□□ 2
COL11A2P13942 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
COL11A2P13942 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.54■■■□□ 2
COL11A2P13942 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
COL11A2P13942 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.53■■■□□ 2
COL11A2P13942 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.53■■■□□ 2
COL11A2P13942 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.53■■■□□ 2
COL11A2P13942 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.53■■■□□ 2
COL11A2P13942 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
COL11A2P13942 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.52■■■□□ 2
COL11A2P13942 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
COL11A2P13942 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
COL11A2P13942 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL11A2P13942 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.51■■□□□ 1.99
COL11A2P13942 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL11A2P13942 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL11A2P13942 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL11A2P13942 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.5■■□□□ 1.99
COL11A2P13942 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
COL11A2P13942 MFSD11-216ENST00000590393 1141 ntBASIC27.5■■□□□ 1.99
COL11A2P13942 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.5■■□□□ 1.99
COL11A2P13942 GUSBP6-202ENST00000438529 1198 ntBASIC27.5■■□□□ 1.99
COL11A2P13942 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL11A2P13942 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
COL11A2P13942 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.49■■□□□ 1.99
COL11A2P13942 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL11A2P13942 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.48■■□□□ 1.99
COL11A2P13942 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL11A2P13942 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
COL11A2P13942 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.48■■□□□ 1.99
COL11A2P13942 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
COL11A2P13942 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL11A2P13942 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms