Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC29.66■■■□□ 2.34
CSB-PGBD3P0DP91 AC073111.5-205ENST00000641717 521 ntBASIC29.66■■■□□ 2.34
CSB-PGBD3P0DP91 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CSB-PGBD3P0DP91 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.66■■■□□ 2.34
CSB-PGBD3P0DP91 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CSB-PGBD3P0DP91 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CSB-PGBD3P0DP91 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 RAP2CP1-201ENST00000605103 478 ntBASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.64■■■□□ 2.34
CSB-PGBD3P0DP91 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
CSB-PGBD3P0DP91 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 TPRG1LP1-201ENST00000598702 760 ntBASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CSB-PGBD3P0DP91 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.62■■■□□ 2.33
CSB-PGBD3P0DP91 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.62■■■□□ 2.33
CSB-PGBD3P0DP91 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC29.62■■■□□ 2.33
CSB-PGBD3P0DP91 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
CSB-PGBD3P0DP91 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CSB-PGBD3P0DP91 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CSB-PGBD3P0DP91 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 AC004854.2-201ENST00000608450 1441 ntBASIC29.6■■■□□ 2.33
CSB-PGBD3P0DP91 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 GAS2L1P2-201ENST00000436355 1356 ntBASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.59■■■□□ 2.33
CSB-PGBD3P0DP91 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 AP004607.4-201ENST00000530158 1459 ntBASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CSB-PGBD3P0DP91 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 AC026185.1-201ENST00000445748 174 ntBASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CSB-PGBD3P0DP91 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 BID-214ENST00000617586 542 ntTSL 5 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.56■■■□□ 2.32
CSB-PGBD3P0DP91 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CSB-PGBD3P0DP91 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms