Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.79■□□□□ 0.6
ZNF728P0DKX0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 GUSBP5-201ENST00000418136 578 ntBASIC18.79■□□□□ 0.6
ZNF728P0DKX0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF728P0DKX0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 AC010997.5-201ENST00000609182 354 ntBASIC18.78■□□□□ 0.6
ZNF728P0DKX0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 AC137767.1-201ENST00000602918 1920 ntBASIC18.78■□□□□ 0.6
ZNF728P0DKX0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF728P0DKX0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF728P0DKX0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF728P0DKX0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF728P0DKX0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF728P0DKX0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 UNC93B8-201ENST00000511903 705 ntBASIC18.76■□□□□ 0.59
ZNF728P0DKX0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF728P0DKX0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF728P0DKX0 AC005703.6-201ENST00000623265 1329 ntBASIC18.74■□□□□ 0.59
ZNF728P0DKX0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF728P0DKX0 ESRRAP2-201ENST00000418437 1549 ntBASIC18.74■□□□□ 0.59
ZNF728P0DKX0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF728P0DKX0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms