Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 UIP3YAR027W 708 nt4.23□□□□□ -1.73
RAD3P06839 SHE1YBL031W 1017 nt4.23□□□□□ -1.73
RAD3P06839 MFM1YPL060W 1242 nt4.23□□□□□ -1.73
RAD3P06839 PNG1YPL096W 1092 nt4.23□□□□□ -1.73
RAD3P06839 SET6YPL165C 1122 nt4.23□□□□□ -1.73
RAD3P06839 OM14YBR230C 405 nt4.23□□□□□ -1.73
RAD3P06839 XRS2YDR369C 2565 nt4.23□□□□□ -1.73
RAD3P06839 OAF1YAL051W 3144 nt4.23□□□□□ -1.73
RAD3P06839 RPP1AYDL081C 321 nt4.22□□□□□ -1.73
RAD3P06839 YDL183CYDL183C 963 nt4.22□□□□□ -1.73
RAD3P06839 RCR2YDR003W 633 nt4.22□□□□□ -1.73
RAD3P06839 COS4YFL062W 1140 nt4.22□□□□□ -1.73
RAD3P06839 CDC12YHR107C 1224 nt4.22□□□□□ -1.73
RAD3P06839 YRA2YKL214C 612 nt4.22□□□□□ -1.73
RAD3P06839 SRP40YKR092C 1221 nt4.22□□□□□ -1.73
RAD3P06839 COS3YML132W 1140 nt4.22□□□□□ -1.73
RAD3P06839 YOR131CYOR131C 657 nt4.22□□□□□ -1.73
RAD3P06839 COS2YBR302C 1140 nt4.22□□□□□ -1.73
RAD3P06839 TMN2YDR107C 2019 nt4.22□□□□□ -1.73
RAD3P06839 KTR7YIL085C 1554 nt4.22□□□□□ -1.73
RAD3P06839 MET17YLR303W 1335 nt4.21□□□□□ -1.73
RAD3P06839 LYS2YBR115C 4179 nt4.21□□□□□ -1.74
RAD3P06839 RPC53YDL150W 1269 nt4.21□□□□□ -1.74
RAD3P06839 BUD16YEL029C 939 nt4.21□□□□□ -1.74
RAD3P06839 KTR2YKR061W 1278 nt4.21□□□□□ -1.74
RAD3P06839 ARH1YDR376W 1482 nt4.21□□□□□ -1.74
RAD3P06839 AVT7YIL088C 1473 nt4.21□□□□□ -1.74
RAD3P06839 RAD26YJR035W 3258 nt4.21□□□□□ -1.74
RAD3P06839 YGL140CYGL140C 3660 nt4.21□□□□□ -1.74
RAD3P06839 MCM2YBL023C 2607 nt4.21□□□□□ -1.74
RAD3P06839 THI22YPR121W 1719 nt4.21□□□□□ -1.74
RAD3P06839 LPP1YDR503C 825 nt4.2□□□□□ -1.74
RAD3P06839 YIL163CYIL163C 354 nt4.2□□□□□ -1.74
RAD3P06839 AAD10YJR155W 867 nt4.2□□□□□ -1.74
RAD3P06839 RET3YPL010W 570 nt4.2□□□□□ -1.74
RAD3P06839 EFM2YBR271W 1260 nt4.2□□□□□ -1.74
RAD3P06839 NUP133YKR082W 3474 nt4.2□□□□□ -1.74
RAD3P06839 FMP30YPL103C 1407 nt4.2□□□□□ -1.74
RAD3P06839 HCM1YCR065W 1695 nt4.19□□□□□ -1.74
RAD3P06839 SWH1YAR042W 3567 nt4.19□□□□□ -1.74
RAD3P06839 NTA1YJR062C 1374 nt4.19□□□□□ -1.74
RAD3P06839 CPR1YDR155C 489 nt4.19□□□□□ -1.74
RAD3P06839 YDR246W-AYDR246W-A 201 nt4.19□□□□□ -1.74
RAD3P06839 SRB5YGR104C 924 nt4.19□□□□□ -1.74
RAD3P06839 COX2Q0250 756 nt4.19□□□□□ -1.74
RAD3P06839 YJR096WYJR096W 849 nt4.19□□□□□ -1.74
RAD3P06839 RSA3YLR221C 663 nt4.19□□□□□ -1.74
RAD3P06839 YOR034C-AYOR034C-A 243 nt4.19□□□□□ -1.74
RAD3P06839 YPR174CYPR174C 666 nt4.19□□□□□ -1.74
RAD3P06839 POL12YBL035C 2118 nt4.19□□□□□ -1.74
RAD3P06839 YDR132CYDR132C 1488 nt4.18□□□□□ -1.74
RAD3P06839 YDL228CYDL228C 642 nt4.18□□□□□ -1.74
RAD3P06839 SAE3YHR079C-A 276 nt4.18□□□□□ -1.74
RAD3P06839 YOR289WYOR289W 756 nt4.18□□□□□ -1.74
RAD3P06839 YPL014WYPL014W 1146 nt4.18□□□□□ -1.74
RAD3P06839 NCR1YPL006W 3513 nt4.18□□□□□ -1.74
RAD3P06839 MMT1YMR177W 1533 nt4.17□□□□□ -1.74
RAD3P06839 NBP2YDR162C 711 nt4.17□□□□□ -1.74
RAD3P06839 BUD25YER014C-A 462 nt4.17□□□□□ -1.74
RAD3P06839 SUP56tL(CAA)A 82 nt4.17□□□□□ -1.74
RAD3P06839 SUP53tL(CAA)C 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)DtL(CAA)D 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)G1tL(CAA)G1 82 nt4.17□□□□□ -1.74
RAD3P06839 SUP54tL(CAA)G2 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)G3tL(CAA)G3 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)KtL(CAA)K 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)LtL(CAA)L 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)MtL(CAA)M 82 nt4.17□□□□□ -1.74
RAD3P06839 tL(CAA)NtL(CAA)N 82 nt4.17□□□□□ -1.74
RAD3P06839 SPC42YKL042W 1092 nt4.17□□□□□ -1.74
RAD3P06839 YPR059CYPR059C 387 nt4.17□□□□□ -1.74
RAD3P06839 MNT4YNR059W 1743 nt4.17□□□□□ -1.74
RAD3P06839 DXO1YDR370C 1329 nt4.17□□□□□ -1.74
RAD3P06839 FLC1YPL221W 2382 nt4.17□□□□□ -1.74
RAD3P06839 CDC6YJL194W 1542 nt4.16□□□□□ -1.74
RAD3P06839 API2YDR525W 330 nt4.16□□□□□ -1.74
RAD3P06839 YJR038CYJR038C 363 nt4.16□□□□□ -1.74
RAD3P06839 PHA2YNL316C 1005 nt4.16□□□□□ -1.74
RAD3P06839 RPS19AYOL121C 435 nt4.16□□□□□ -1.74
RAD3P06839 BDP1YNL039W 1785 nt4.16□□□□□ -1.74
RAD3P06839 KRI1YNL308C 1776 nt4.16□□□□□ -1.74
RAD3P06839 KIP3YGL216W 2418 nt4.16□□□□□ -1.74
RAD3P06839 HST1YOL068C 1512 nt4.16□□□□□ -1.74
RAD3P06839 KRE29YER038C 1395 nt4.15□□□□□ -1.74
RAD3P06839 OCT1YKL134C 2319 nt4.15□□□□□ -1.74
RAD3P06839 TAF12YDR145W 1620 nt4.15□□□□□ -1.74
RAD3P06839 ZDS1YMR273C 2748 nt4.15□□□□□ -1.75
RAD3P06839 CWC2YDL209C 1020 nt4.15□□□□□ -1.75
RAD3P06839 YER085CYER085C 522 nt4.15□□□□□ -1.75
RAD3P06839 MRPL25YGR076C 474 nt4.15□□□□□ -1.75
RAD3P06839 AIR1YIL079C 1083 nt4.15□□□□□ -1.75
RAD3P06839 ALG5YPL227C 1005 nt4.15□□□□□ -1.75
RAD3P06839 PUT2YHR037W 1728 nt4.15□□□□□ -1.75
RAD3P06839 YCR085WYCR085W 354 nt4.14□□□□□ -1.75
RAD3P06839 DAS2YDR020C 699 nt4.14□□□□□ -1.75
RAD3P06839 PCL6YER059W 1263 nt4.14□□□□□ -1.75
RAD3P06839 MTM1YGR257C 1101 nt4.14□□□□□ -1.75
RAD3P06839 HEK2YBL032W 1146 nt4.14□□□□□ -1.75
RAD3P06839 NAT3YPR131C 588 nt4.14□□□□□ -1.75
RAD3P06839 KRE5YOR336W 4098 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms