Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL5A2P05997 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.69■■■□□ 2.34
COL5A2P05997 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.69■■■□□ 2.34
COL5A2P05997 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
COL5A2P05997 MIR663A-201ENST00000385250 93 ntBASIC29.69■■■□□ 2.34
COL5A2P05997 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.69■■■□□ 2.34
COL5A2P05997 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL5A2P05997 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
COL5A2P05997 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
COL5A2P05997 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 AL109923.1-201ENST00000618799 583 ntBASIC29.68■■■□□ 2.34
COL5A2P05997 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
COL5A2P05997 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL5A2P05997 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL5A2P05997 NCF1B-203ENST00000435988 1254 ntBASIC29.67■■■□□ 2.34
COL5A2P05997 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC29.66■■■□□ 2.34
COL5A2P05997 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
COL5A2P05997 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.66■■■□□ 2.34
COL5A2P05997 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
COL5A2P05997 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL5A2P05997 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL5A2P05997 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.65■■■□□ 2.34
COL5A2P05997 LINC01529-204ENST00000636474 1715 ntBASIC29.65■■■□□ 2.34
COL5A2P05997 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
COL5A2P05997 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
COL5A2P05997 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.64■■■□□ 2.34
COL5A2P05997 ESRRAP2-201ENST00000418437 1549 ntBASIC29.64■■■□□ 2.34
COL5A2P05997 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
COL5A2P05997 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL5A2P05997 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL5A2P05997 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC29.63■■■□□ 2.33
COL5A2P05997 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL5A2P05997 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.63■■■□□ 2.33
COL5A2P05997 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL5A2P05997 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
COL5A2P05997 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.62■■■□□ 2.33
COL5A2P05997 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL5A2P05997 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC29.62■■■□□ 2.33
COL5A2P05997 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC29.62■■■□□ 2.33
COL5A2P05997 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
COL5A2P05997 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC29.61■■■□□ 2.33
COL5A2P05997 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
COL5A2P05997 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 KRT19P1-201ENST00000405746 1186 ntBASIC29.61■■■□□ 2.33
COL5A2P05997 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC29.61■■■□□ 2.33
COL5A2P05997 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL5A2P05997 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL5A2P05997 BX005040.4-201ENST00000637145 1518 ntBASIC29.6■■■□□ 2.33
COL5A2P05997 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL5A2P05997 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC29.6■■■□□ 2.33
COL5A2P05997 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL5A2P05997 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL5A2P05997 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
COL5A2P05997 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC29.59■■■□□ 2.33
COL5A2P05997 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
COL5A2P05997 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.59■■■□□ 2.33
COL5A2P05997 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC29.59■■■□□ 2.33
COL5A2P05997 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
COL5A2P05997 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.59■■■□□ 2.33
COL5A2P05997 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.59■■■□□ 2.33
COL5A2P05997 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
COL5A2P05997 AC135731.1-201ENST00000569415 2548 ntBASIC29.58■■■□□ 2.33
COL5A2P05997 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC29.58■■■□□ 2.33
COL5A2P05997 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
COL5A2P05997 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.57■■■□□ 2.32
COL5A2P05997 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC29.57■■■□□ 2.32
COL5A2P05997 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
COL5A2P05997 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
COL5A2P05997 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL5A2P05997 METTL26-203ENST00000397664 604 ntTSL 2 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms