Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
APPP05067 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
APPP05067 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
APPP05067 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
APPP05067 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.53■■□□□ 1.84
APPP05067 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.53■■□□□ 1.84
APPP05067 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.53■■□□□ 1.84
APPP05067 AC142381.2-201ENST00000566120 298 ntBASIC26.53■■□□□ 1.84
APPP05067 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.53■■□□□ 1.84
APPP05067 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.53■■□□□ 1.84
APPP05067 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
APPP05067 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
APPP05067 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
APPP05067 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.52■■□□□ 1.84
APPP05067 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.52■■□□□ 1.84
APPP05067 AL031432.3-201ENST00000607698 485 ntBASIC26.52■■□□□ 1.84
APPP05067 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
APPP05067 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
APPP05067 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
APPP05067 AC004687.1-201ENST00000579003 1625 ntBASIC26.51■■□□□ 1.83
APPP05067 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.51■■□□□ 1.83
APPP05067 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.51■■□□□ 1.83
APPP05067 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.51■■□□□ 1.83
APPP05067 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.51■■□□□ 1.83
APPP05067 AC008764.7-201ENST00000593779 1081 ntBASIC26.51■■□□□ 1.83
APPP05067 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
APPP05067 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.51■■□□□ 1.83
APPP05067 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
APPP05067 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.5■■□□□ 1.83
APPP05067 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
APPP05067 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.5■■□□□ 1.83
APPP05067 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.5■■□□□ 1.83
APPP05067 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.5■■□□□ 1.83
APPP05067 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.5■■□□□ 1.83
APPP05067 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.5■■□□□ 1.83
APPP05067 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
APPP05067 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.5■■□□□ 1.83
APPP05067 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
APPP05067 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
APPP05067 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.49■■□□□ 1.83
APPP05067 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.49■■□□□ 1.83
APPP05067 SUDS3P1-201ENST00000505831 966 ntBASIC26.49■■□□□ 1.83
APPP05067 AF213884.3-201ENST00000563833 479 ntBASIC26.49■■□□□ 1.83
APPP05067 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.49■■□□□ 1.83
APPP05067 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.49■■□□□ 1.83
APPP05067 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
APPP05067 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
APPP05067 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
APPP05067 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.48■■□□□ 1.83
APPP05067 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.48■■□□□ 1.83
APPP05067 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
APPP05067 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
APPP05067 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
APPP05067 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
APPP05067 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
APPP05067 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
APPP05067 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
APPP05067 AC019069.1-201ENST00000610008 1333 ntBASIC26.47■■□□□ 1.83
APPP05067 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.47■■□□□ 1.83
APPP05067 AP001330.3-201ENST00000520123 633 ntBASIC26.47■■□□□ 1.83
APPP05067 AL136967.2-201ENST00000623968 743 ntBASIC26.47■■□□□ 1.83
APPP05067 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.46■■□□□ 1.83
APPP05067 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
APPP05067 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.46■■□□□ 1.83
APPP05067 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.46■■□□□ 1.83
APPP05067 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
APPP05067 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.46■■□□□ 1.83
APPP05067 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
APPP05067 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
APPP05067 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.45■■□□□ 1.82
APPP05067 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
APPP05067 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
APPP05067 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
APPP05067 DUSP8P3-201ENST00000399571 1760 ntBASIC26.45■■□□□ 1.82
APPP05067 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
APPP05067 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 MIR939-201ENST00000401314 82 ntBASIC26.44■■□□□ 1.82
APPP05067 SLC47A1P1-202ENST00000449666 945 ntBASIC26.44■■□□□ 1.82
APPP05067 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 AC233992.3-201ENST00000607491 485 ntBASIC26.44■■□□□ 1.82
APPP05067 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
APPP05067 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms