Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHGBP05060 AP001330.3-201ENST00000520123 633 ntBASIC26.78■■□□□ 1.88
CHGBP05060 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.78■■□□□ 1.88
CHGBP05060 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
CHGBP05060 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.78■■□□□ 1.88
CHGBP05060 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.78■■□□□ 1.88
CHGBP05060 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHGBP05060 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHGBP05060 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHGBP05060 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CHGBP05060 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHGBP05060 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
CHGBP05060 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CHGBP05060 DUSP8P5-201ENST00000422884 1815 ntBASIC26.76■■□□□ 1.88
CHGBP05060 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
CHGBP05060 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHGBP05060 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.76■■□□□ 1.87
CHGBP05060 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CHGBP05060 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHGBP05060 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHGBP05060 AF213884.3-201ENST00000563833 479 ntBASIC26.76■■□□□ 1.87
CHGBP05060 AL138724.1-201ENST00000606771 1088 ntBASIC26.76■■□□□ 1.87
CHGBP05060 AL136967.2-201ENST00000623968 743 ntBASIC26.76■■□□□ 1.87
CHGBP05060 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
CHGBP05060 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHGBP05060 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
CHGBP05060 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.75■■□□□ 1.87
CHGBP05060 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CHGBP05060 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHGBP05060 SLC47A1P1-202ENST00000449666 945 ntBASIC26.75■■□□□ 1.87
CHGBP05060 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CHGBP05060 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.75■■□□□ 1.87
CHGBP05060 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.75■■□□□ 1.87
CHGBP05060 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.75■■□□□ 1.87
CHGBP05060 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.75■■□□□ 1.87
CHGBP05060 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHGBP05060 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHGBP05060 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CHGBP05060 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CHGBP05060 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.74■■□□□ 1.87
CHGBP05060 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CHGBP05060 AC133561.4-201ENST00000566112 224 ntBASIC26.74■■□□□ 1.87
CHGBP05060 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.74■■□□□ 1.87
CHGBP05060 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.74■■□□□ 1.87
CHGBP05060 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.74■■□□□ 1.87
CHGBP05060 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CHGBP05060 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.73■■□□□ 1.87
CHGBP05060 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CHGBP05060 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.73■■□□□ 1.87
CHGBP05060 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CHGBP05060 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
CHGBP05060 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CHGBP05060 MIR939-201ENST00000401314 82 ntBASIC26.72■■□□□ 1.87
CHGBP05060 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.72■■□□□ 1.87
CHGBP05060 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
CHGBP05060 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.72■■□□□ 1.87
CHGBP05060 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.72■■□□□ 1.87
CHGBP05060 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CHGBP05060 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHGBP05060 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CHGBP05060 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.71■■□□□ 1.87
CHGBP05060 EDA-201ENST00000338901 1233 ntBASIC26.71■■□□□ 1.87
CHGBP05060 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.71■■□□□ 1.87
CHGBP05060 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.71■■□□□ 1.87
CHGBP05060 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.71■■□□□ 1.87
CHGBP05060 AC008764.7-201ENST00000593779 1081 ntBASIC26.71■■□□□ 1.87
CHGBP05060 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.71■■□□□ 1.87
CHGBP05060 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.71■■□□□ 1.87
CHGBP05060 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CHGBP05060 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CHGBP05060 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHGBP05060 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.7■■□□□ 1.86
CHGBP05060 AL355001.2-201ENST00000620617 1191 ntBASIC26.7■■□□□ 1.86
CHGBP05060 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGBP05060 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.69■■□□□ 1.86
CHGBP05060 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHGBP05060 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHGBP05060 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGBP05060 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.69■■□□□ 1.86
CHGBP05060 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CHGBP05060 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CHGBP05060 AC142381.2-201ENST00000566120 298 ntBASIC26.68■■□□□ 1.86
CHGBP05060 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CHGBP05060 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
CHGBP05060 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHGBP05060 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CHGBP05060 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGBP05060 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGBP05060 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGBP05060 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CHGBP05060 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHGBP05060 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.67■■□□□ 1.86
CHGBP05060 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CHGBP05060 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms