Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.69■□□□□ 0.74
APOA1P02647 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.69■□□□□ 0.74
APOA1P02647 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
APOA1P02647 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
APOA1P02647 AL161729.1-201ENST00000604104 1402 ntBASIC19.68■□□□□ 0.74
APOA1P02647 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
APOA1P02647 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.68■□□□□ 0.74
APOA1P02647 AL157400.5-201ENST00000507624 621 ntBASIC19.68■□□□□ 0.74
APOA1P02647 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA1P02647 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA1P02647 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
APOA1P02647 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.67■□□□□ 0.74
APOA1P02647 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
APOA1P02647 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
APOA1P02647 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
APOA1P02647 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
APOA1P02647 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA1P02647 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.67■□□□□ 0.74
APOA1P02647 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
APOA1P02647 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.66■□□□□ 0.74
APOA1P02647 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA1P02647 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
APOA1P02647 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA1P02647 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.66■□□□□ 0.74
APOA1P02647 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
APOA1P02647 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOA1P02647 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
APOA1P02647 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
APOA1P02647 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
APOA1P02647 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA1P02647 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA1P02647 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA1P02647 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.65■□□□□ 0.74
APOA1P02647 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
APOA1P02647 AC026310.3-201ENST00000625186 2373 ntBASIC19.65■□□□□ 0.74
APOA1P02647 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA1P02647 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.65■□□□□ 0.74
APOA1P02647 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APOA1P02647 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
APOA1P02647 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
APOA1P02647 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.64■□□□□ 0.74
APOA1P02647 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 KRT18P10-201ENST00000388836 1287 ntBASIC19.64■□□□□ 0.73
APOA1P02647 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.64■□□□□ 0.73
APOA1P02647 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.64■□□□□ 0.73
APOA1P02647 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
APOA1P02647 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
APOA1P02647 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
APOA1P02647 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
APOA1P02647 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.64■□□□□ 0.73
APOA1P02647 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.64■□□□□ 0.73
APOA1P02647 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOA1P02647 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.63■□□□□ 0.73
APOA1P02647 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.63■□□□□ 0.73
APOA1P02647 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.63■□□□□ 0.73
APOA1P02647 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
APOA1P02647 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.63■□□□□ 0.73
APOA1P02647 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOA1P02647 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOA1P02647 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
APOA1P02647 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
APOA1P02647 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOA1P02647 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.62■□□□□ 0.73
APOA1P02647 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOA1P02647 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOA1P02647 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms