Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL1A1P02452 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.96■■□□□ 1.91
COL1A1P02452 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
COL1A1P02452 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL1A1P02452 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL1A1P02452 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.95■■□□□ 1.91
COL1A1P02452 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.95■■□□□ 1.91
COL1A1P02452 AC012414.1-201ENST00000556676 535 ntBASIC26.95■■□□□ 1.91
COL1A1P02452 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.95■■□□□ 1.91
COL1A1P02452 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
COL1A1P02452 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL1A1P02452 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
COL1A1P02452 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.94■■□□□ 1.9
COL1A1P02452 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
COL1A1P02452 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.94■■□□□ 1.9
COL1A1P02452 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
COL1A1P02452 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL1A1P02452 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 MIR572-201ENST00000384983 95 ntBASIC26.93■■□□□ 1.9
COL1A1P02452 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.93■■□□□ 1.9
COL1A1P02452 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.93■■□□□ 1.9
COL1A1P02452 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
COL1A1P02452 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL1A1P02452 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL1A1P02452 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.93■■□□□ 1.9
COL1A1P02452 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.93■■□□□ 1.9
COL1A1P02452 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
COL1A1P02452 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.92■■□□□ 1.9
COL1A1P02452 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
COL1A1P02452 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.92■■□□□ 1.9
COL1A1P02452 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
COL1A1P02452 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL1A1P02452 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
COL1A1P02452 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 AL354811.1-201ENST00000610286 706 ntBASIC26.91■■□□□ 1.9
COL1A1P02452 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL1A1P02452 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.91■■□□□ 1.9
COL1A1P02452 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
COL1A1P02452 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.91■■□□□ 1.9
COL1A1P02452 AC004687.1-201ENST00000579003 1625 ntBASIC26.91■■□□□ 1.9
COL1A1P02452 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.9■■□□□ 1.9
COL1A1P02452 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
COL1A1P02452 AL353803.4-201ENST00000565882 1934 ntBASIC26.9■■□□□ 1.9
COL1A1P02452 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
COL1A1P02452 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
COL1A1P02452 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.9■■□□□ 1.9
COL1A1P02452 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.9■■□□□ 1.9
COL1A1P02452 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL1A1P02452 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL1A1P02452 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
COL1A1P02452 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.89■■□□□ 1.9
COL1A1P02452 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.89■■□□□ 1.9
COL1A1P02452 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL1A1P02452 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
COL1A1P02452 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.89■■□□□ 1.9
COL1A1P02452 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.89■■□□□ 1.89
COL1A1P02452 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.88■■□□□ 1.89
COL1A1P02452 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.88■■□□□ 1.89
COL1A1P02452 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.88■■□□□ 1.89
COL1A1P02452 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.88■■□□□ 1.89
COL1A1P02452 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL1A1P02452 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL1A1P02452 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
COL1A1P02452 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL1A1P02452 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL1A1P02452 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
COL1A1P02452 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL1A1P02452 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
COL1A1P02452 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.87■■□□□ 1.89
COL1A1P02452 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
COL1A1P02452 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.87■■□□□ 1.89
COL1A1P02452 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.87■■□□□ 1.89
COL1A1P02452 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms