Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT4O95628 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT4O95628 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT4O95628 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 AP001330.3-201ENST00000520123 633 ntBASIC19.59■□□□□ 0.73
CNOT4O95628 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.59■□□□□ 0.73
CNOT4O95628 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CNOT4O95628 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.59■□□□□ 0.73
CNOT4O95628 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNOT4O95628 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CNOT4O95628 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CNOT4O95628 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.58■□□□□ 0.73
CNOT4O95628 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNOT4O95628 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.58■□□□□ 0.72
CNOT4O95628 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CNOT4O95628 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CNOT4O95628 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.58■□□□□ 0.72
CNOT4O95628 AL136967.2-201ENST00000623968 743 ntBASIC19.58■□□□□ 0.72
CNOT4O95628 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT4O95628 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT4O95628 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNOT4O95628 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 RASA4CP-201ENST00000424092 1398 ntBASIC19.57■□□□□ 0.72
CNOT4O95628 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT4O95628 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT4O95628 AC092068.2-201ENST00000590491 1708 ntBASIC19.57■□□□□ 0.72
CNOT4O95628 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CNOT4O95628 AC233992.3-201ENST00000607491 485 ntBASIC19.57■□□□□ 0.72
CNOT4O95628 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT4O95628 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNOT4O95628 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT4O95628 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT4O95628 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CNOT4O95628 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT4O95628 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.56■□□□□ 0.72
CNOT4O95628 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT4O95628 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT4O95628 OR2I1P-207ENST00000453522 948 ntBASIC19.56■□□□□ 0.72
CNOT4O95628 AC105265.2-201ENST00000467189 838 ntBASIC19.56■□□□□ 0.72
CNOT4O95628 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT4O95628 AF213884.3-201ENST00000563833 479 ntBASIC19.56■□□□□ 0.72
CNOT4O95628 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT4O95628 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CNOT4O95628 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT4O95628 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT4O95628 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT4O95628 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.55■□□□□ 0.72
CNOT4O95628 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 AL353803.4-201ENST00000565882 1934 ntBASIC19.55■□□□□ 0.72
CNOT4O95628 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT4O95628 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT4O95628 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT4O95628 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.54■□□□□ 0.72
CNOT4O95628 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CNOT4O95628 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.54■□□□□ 0.72
CNOT4O95628 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.54■□□□□ 0.72
CNOT4O95628 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
CNOT4O95628 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.54■□□□□ 0.72
CNOT4O95628 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms