Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
MBD4O95243 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.55■■□□□ 1.84
MBD4O95243 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MBD4O95243 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
MBD4O95243 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MBD4O95243 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MBD4O95243 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.55■■□□□ 1.84
MBD4O95243 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.55■■□□□ 1.84
MBD4O95243 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MBD4O95243 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
MBD4O95243 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
MBD4O95243 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
MBD4O95243 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
MBD4O95243 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
MBD4O95243 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
MBD4O95243 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
MBD4O95243 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.53■■□□□ 1.84
MBD4O95243 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
MBD4O95243 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.53■■□□□ 1.84
MBD4O95243 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.53■■□□□ 1.84
MBD4O95243 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MBD4O95243 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
MBD4O95243 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.53■■□□□ 1.84
MBD4O95243 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MBD4O95243 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.53■■□□□ 1.84
MBD4O95243 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.53■■□□□ 1.84
MBD4O95243 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MBD4O95243 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.53■■□□□ 1.84
MBD4O95243 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MBD4O95243 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MBD4O95243 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
MBD4O95243 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MBD4O95243 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
MBD4O95243 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.52■■□□□ 1.84
MBD4O95243 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.52■■□□□ 1.84
MBD4O95243 AC126544.1-201ENST00000580842 1059 ntBASIC26.52■■□□□ 1.84
MBD4O95243 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
MBD4O95243 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
MBD4O95243 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
MBD4O95243 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
MBD4O95243 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MBD4O95243 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
MBD4O95243 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
MBD4O95243 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.51■■□□□ 1.83
MBD4O95243 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.51■■□□□ 1.83
MBD4O95243 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
MBD4O95243 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
MBD4O95243 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.5■■□□□ 1.83
MBD4O95243 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
MBD4O95243 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
MBD4O95243 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.5■■□□□ 1.83
MBD4O95243 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
MBD4O95243 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.49■■□□□ 1.83
MBD4O95243 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.49■■□□□ 1.83
MBD4O95243 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
MBD4O95243 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
MBD4O95243 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MBD4O95243 DUSP8P3-201ENST00000399571 1760 ntBASIC26.48■■□□□ 1.83
MBD4O95243 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
MBD4O95243 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
MBD4O95243 MIR935-201ENST00000401179 91 ntBASIC26.48■■□□□ 1.83
MBD4O95243 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
MBD4O95243 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
MBD4O95243 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
MBD4O95243 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
MBD4O95243 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.47■■□□□ 1.83
MBD4O95243 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.47■■□□□ 1.83
MBD4O95243 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.46■■□□□ 1.83
MBD4O95243 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.46■■□□□ 1.83
MBD4O95243 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
MBD4O95243 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MBD4O95243 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.46■■□□□ 1.83
MBD4O95243 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
MBD4O95243 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.83
MBD4O95243 TSPY26P-201ENST00000476365 1326 ntBASIC26.45■■□□□ 1.83
MBD4O95243 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.45■■□□□ 1.82
MBD4O95243 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
MBD4O95243 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.45■■□□□ 1.82
MBD4O95243 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.45■■□□□ 1.82
MBD4O95243 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
MBD4O95243 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
MBD4O95243 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms