Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC012354.3-201ENST00000623734 483 ntBASIC19.34■□□□□ 0.69
KDM4BO94953 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KDM4BO94953 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
KDM4BO94953 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KDM4BO94953 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KDM4BO94953 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.33■□□□□ 0.69
KDM4BO94953 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.33■□□□□ 0.69
KDM4BO94953 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.33■□□□□ 0.69
KDM4BO94953 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KDM4BO94953 MIR4281-201ENST00000580852 62 ntBASIC19.33■□□□□ 0.68
KDM4BO94953 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KDM4BO94953 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KDM4BO94953 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KDM4BO94953 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KDM4BO94953 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KDM4BO94953 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.33■□□□□ 0.68
KDM4BO94953 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.33■□□□□ 0.68
KDM4BO94953 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KDM4BO94953 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
KDM4BO94953 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.32■□□□□ 0.68
KDM4BO94953 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.32■□□□□ 0.68
KDM4BO94953 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.32■□□□□ 0.68
KDM4BO94953 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.32■□□□□ 0.68
KDM4BO94953 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KDM4BO94953 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDM4BO94953 AF131216.4-201ENST00000638924 1588 ntBASIC19.32■□□□□ 0.68
KDM4BO94953 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KDM4BO94953 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.31■□□□□ 0.68
KDM4BO94953 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.31■□□□□ 0.68
KDM4BO94953 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.31■□□□□ 0.68
KDM4BO94953 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.31■□□□□ 0.68
KDM4BO94953 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.31■□□□□ 0.68
KDM4BO94953 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.31■□□□□ 0.68
KDM4BO94953 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDM4BO94953 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KDM4BO94953 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KDM4BO94953 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
KDM4BO94953 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.3■□□□□ 0.68
KDM4BO94953 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.3■□□□□ 0.68
KDM4BO94953 MIR4508-201ENST00000584178 70 ntBASIC19.3■□□□□ 0.68
KDM4BO94953 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KDM4BO94953 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
KDM4BO94953 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
KDM4BO94953 AC242852.2-201ENST00000615738 1807 ntBASIC19.3■□□□□ 0.68
KDM4BO94953 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDM4BO94953 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4BO94953 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4BO94953 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4BO94953 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.29■□□□□ 0.68
KDM4BO94953 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KDM4BO94953 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4BO94953 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4BO94953 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.29■□□□□ 0.68
KDM4BO94953 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDM4BO94953 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.28■□□□□ 0.68
KDM4BO94953 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KDM4BO94953 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KDM4BO94953 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.28■□□□□ 0.68
KDM4BO94953 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.28■□□□□ 0.68
KDM4BO94953 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KDM4BO94953 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDM4BO94953 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
KDM4BO94953 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDM4BO94953 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDM4BO94953 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.27■□□□□ 0.68
KDM4BO94953 AL033527.3-201ENST00000566366 1196 ntBASIC19.27■□□□□ 0.68
KDM4BO94953 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
KDM4BO94953 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KDM4BO94953 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms