Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM3O75382 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM3O75382 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM3O75382 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM3O75382 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM3O75382 AL136162.1-201ENST00000607711 1078 ntBASIC20.51■□□□□ 0.87
TRIM3O75382 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM3O75382 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM3O75382 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TRIM3O75382 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM3O75382 SYT6-210ENST00000641643 1587 ntBASIC20.51■□□□□ 0.87
TRIM3O75382 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM3O75382 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM3O75382 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM3O75382 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM3O75382 PBX2P1-201ENST00000493219 1291 ntBASIC20.5■□□□□ 0.87
TRIM3O75382 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM3O75382 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM3O75382 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM3O75382 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM3O75382 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
TRIM3O75382 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM3O75382 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM3O75382 AL024507.2-201ENST00000606070 2574 ntBASIC20.49■□□□□ 0.87
TRIM3O75382 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 AC135279.3-201ENST00000610945 1311 ntBASIC20.49■□□□□ 0.87
TRIM3O75382 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM3O75382 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM3O75382 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRIM3O75382 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 SERBP1P1-201ENST00000396021 1160 ntBASIC20.48■□□□□ 0.87
TRIM3O75382 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM3O75382 AC006455.2-201ENST00000429931 906 ntBASIC20.48■□□□□ 0.87
TRIM3O75382 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 AC024257.2-201ENST00000549699 147 ntBASIC20.48■□□□□ 0.87
TRIM3O75382 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM3O75382 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM3O75382 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM3O75382 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM3O75382 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM3O75382 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM3O75382 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM3O75382 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM3O75382 AL138724.1-201ENST00000606771 1088 ntBASIC20.47■□□□□ 0.87
TRIM3O75382 AC009086.3-201ENST00000623486 1008 ntBASIC20.47■□□□□ 0.87
TRIM3O75382 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM3O75382 AC019069.1-201ENST00000610008 1333 ntBASIC20.47■□□□□ 0.87
TRIM3O75382 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM3O75382 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.46■□□□□ 0.87
TRIM3O75382 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 AC005837.3-201ENST00000612163 286 ntBASIC20.46■□□□□ 0.87
TRIM3O75382 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM3O75382 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRIM3O75382 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM3O75382 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM3O75382 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM3O75382 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRIM3O75382 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRIM3O75382 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
TRIM3O75382 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM3O75382 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms