Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.7■□□□□ 0.58
PDCD6O75340 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDCD6O75340 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.69■□□□□ 0.58
PDCD6O75340 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
PDCD6O75340 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDCD6O75340 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDCD6O75340 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.69■□□□□ 0.58
PDCD6O75340 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDCD6O75340 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.68■□□□□ 0.58
PDCD6O75340 AC139530.1-201ENST00000575312 1977 ntBASIC18.68■□□□□ 0.58
PDCD6O75340 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 AC092053.2-201ENST00000640557 1818 ntBASIC18.68■□□□□ 0.58
PDCD6O75340 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD6O75340 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD6O75340 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
PDCD6O75340 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDCD6O75340 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDCD6O75340 FP325331.1-202ENST00000623531 1380 ntBASIC18.68■□□□□ 0.58
PDCD6O75340 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.67■□□□□ 0.58
PDCD6O75340 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDCD6O75340 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD6O75340 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD6O75340 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PDCD6O75340 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
PDCD6O75340 AC087742.1-201ENST00000575880 1738 ntBASIC18.67■□□□□ 0.58
PDCD6O75340 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.67■□□□□ 0.58
PDCD6O75340 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.67■□□□□ 0.58
PDCD6O75340 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PDCD6O75340 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDCD6O75340 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.67■□□□□ 0.58
PDCD6O75340 AC021242.3-201ENST00000607598 1377 ntBASIC18.67■□□□□ 0.58
PDCD6O75340 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDCD6O75340 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PDCD6O75340 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDCD6O75340 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDCD6O75340 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDCD6O75340 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 BX664725.1-201ENST00000438252 379 ntBASIC18.65■□□□□ 0.58
PDCD6O75340 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDCD6O75340 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDCD6O75340 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDCD6O75340 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PDCD6O75340 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.64■□□□□ 0.58
PDCD6O75340 AC080038.3-201ENST00000623346 1952 ntBASIC18.64■□□□□ 0.58
PDCD6O75340 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.64■□□□□ 0.58
PDCD6O75340 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PDCD6O75340 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD6O75340 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDCD6O75340 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.64■□□□□ 0.57
PDCD6O75340 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDCD6O75340 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDCD6O75340 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
PDCD6O75340 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms