Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.54■■□□□ 1.36
TBC1D4O60343 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.54■■□□□ 1.36
TBC1D4O60343 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.54■■□□□ 1.36
TBC1D4O60343 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 ABCB10P4-201ENST00000566803 2184 ntBASIC23.53■■□□□ 1.36
TBC1D4O60343 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
TBC1D4O60343 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.53■■□□□ 1.36
TBC1D4O60343 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.53■■□□□ 1.36
TBC1D4O60343 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D4O60343 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 AC012414.1-201ENST00000556676 535 ntBASIC23.53■■□□□ 1.36
TBC1D4O60343 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D4O60343 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.53■■□□□ 1.36
TBC1D4O60343 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D4O60343 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D4O60343 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D4O60343 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D4O60343 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TBC1D4O60343 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D4O60343 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.52■■□□□ 1.36
TBC1D4O60343 AC123595.1-201ENST00000440769 1046 ntBASIC23.52■■□□□ 1.36
TBC1D4O60343 AL354811.1-201ENST00000610286 706 ntBASIC23.52■■□□□ 1.36
TBC1D4O60343 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.52■■□□□ 1.36
TBC1D4O60343 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D4O60343 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D4O60343 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TBC1D4O60343 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TBC1D4O60343 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TBC1D4O60343 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TBC1D4O60343 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TBC1D4O60343 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TBC1D4O60343 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.51■■□□□ 1.35
TBC1D4O60343 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.51■■□□□ 1.35
TBC1D4O60343 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TBC1D4O60343 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TBC1D4O60343 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.51■■□□□ 1.35
TBC1D4O60343 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.51■■□□□ 1.35
TBC1D4O60343 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.51■■□□□ 1.35
TBC1D4O60343 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.51■■□□□ 1.35
TBC1D4O60343 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.51■■□□□ 1.35
TBC1D4O60343 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D4O60343 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D4O60343 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.5■■□□□ 1.35
TBC1D4O60343 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.5■■□□□ 1.35
TBC1D4O60343 AC034268.1-201ENST00000441047 882 ntBASIC23.5■■□□□ 1.35
TBC1D4O60343 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.5■■□□□ 1.35
TBC1D4O60343 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D4O60343 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D4O60343 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TBC1D4O60343 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D4O60343 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D4O60343 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TBC1D4O60343 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D4O60343 MIR6084-201ENST00000622012 110 ntBASIC23.49■■□□□ 1.35
TBC1D4O60343 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D4O60343 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D4O60343 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TBC1D4O60343 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D4O60343 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D4O60343 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D4O60343 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
TBC1D4O60343 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.48■■□□□ 1.35
TBC1D4O60343 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D4O60343 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L2-201ENST00000561772 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L6-201ENST00000626483 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L1-201ENST00000627662 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L8-201ENST00000629013 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L3-201ENST00000630187 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L7-201ENST00000630678 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 DUX4L5-201ENST00000630834 1275 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D4O60343 AL353803.4-201ENST00000565882 1934 ntBASIC23.48■■□□□ 1.35
TBC1D4O60343 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D4O60343 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D4O60343 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D4O60343 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TBC1D4O60343 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TBC1D4O60343 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.47■■□□□ 1.35
TBC1D4O60343 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TBC1D4O60343 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D4O60343 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
TBC1D4O60343 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.47■■□□□ 1.35
TBC1D4O60343 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.47■■□□□ 1.35
TBC1D4O60343 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.47■■□□□ 1.35
TBC1D4O60343 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D4O60343 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D4O60343 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms