Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKNO60260 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKNO60260 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKNO60260 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.63■□□□□ 0.89
PRKNO60260 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKNO60260 AP001330.3-201ENST00000520123 633 ntBASIC20.63■□□□□ 0.89
PRKNO60260 AF213884.3-201ENST00000563833 479 ntBASIC20.63■□□□□ 0.89
PRKNO60260 AC142381.2-201ENST00000566120 298 ntBASIC20.63■□□□□ 0.89
PRKNO60260 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRKNO60260 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKNO60260 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
PRKNO60260 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRKNO60260 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRKNO60260 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.62■□□□□ 0.89
PRKNO60260 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.62■□□□□ 0.89
PRKNO60260 AL136967.2-201ENST00000623968 743 ntBASIC20.62■□□□□ 0.89
PRKNO60260 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKNO60260 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
PRKNO60260 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRKNO60260 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRKNO60260 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKNO60260 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.6■□□□□ 0.89
PRKNO60260 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.6■□□□□ 0.89
PRKNO60260 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
PRKNO60260 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.6■□□□□ 0.89
PRKNO60260 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRKNO60260 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRKNO60260 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKNO60260 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.59■□□□□ 0.89
PRKNO60260 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PRKNO60260 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRKNO60260 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PRKNO60260 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
PRKNO60260 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.59■□□□□ 0.89
PRKNO60260 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.59■□□□□ 0.89
PRKNO60260 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.59■□□□□ 0.89
PRKNO60260 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKNO60260 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRKNO60260 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.58■□□□□ 0.89
PRKNO60260 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRKNO60260 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.58■□□□□ 0.89
PRKNO60260 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PRKNO60260 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.58■□□□□ 0.89
PRKNO60260 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRKNO60260 AC008764.7-201ENST00000593779 1081 ntBASIC20.58■□□□□ 0.89
PRKNO60260 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
PRKNO60260 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRKNO60260 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
PRKNO60260 DUSP8P5-201ENST00000422884 1815 ntBASIC20.57■□□□□ 0.88
PRKNO60260 AC004687.1-201ENST00000579003 1625 ntBASIC20.57■□□□□ 0.88
PRKNO60260 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
PRKNO60260 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.57■□□□□ 0.88
PRKNO60260 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.57■□□□□ 0.88
PRKNO60260 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.57■□□□□ 0.88
PRKNO60260 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRKNO60260 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRKNO60260 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRKNO60260 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.57■□□□□ 0.88
PRKNO60260 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRKNO60260 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRKNO60260 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRKNO60260 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms