Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC133552.2-201ENST00000619106 1032 ntBASIC18.05■□□□□ 0.48
SSSCA1O60232 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSSCA1O60232 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SSSCA1O60232 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SSSCA1O60232 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSSCA1O60232 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SSSCA1O60232 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSSCA1O60232 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SSSCA1O60232 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
SSSCA1O60232 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSSCA1O60232 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.04■□□□□ 0.48
SSSCA1O60232 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSSCA1O60232 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.04■□□□□ 0.48
SSSCA1O60232 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SSSCA1O60232 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.04■□□□□ 0.48
SSSCA1O60232 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.04■□□□□ 0.48
SSSCA1O60232 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.04■□□□□ 0.48
SSSCA1O60232 AC018755.3-202ENST00000596210 929 ntBASIC18.04■□□□□ 0.48
SSSCA1O60232 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSSCA1O60232 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.04■□□□□ 0.48
SSSCA1O60232 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SSSCA1O60232 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SSSCA1O60232 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SSSCA1O60232 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SSSCA1O60232 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SSSCA1O60232 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.02■□□□□ 0.48
SSSCA1O60232 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SSSCA1O60232 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.02■□□□□ 0.48
SSSCA1O60232 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SSSCA1O60232 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SSSCA1O60232 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SSSCA1O60232 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SSSCA1O60232 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SSSCA1O60232 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.02■□□□□ 0.47
SSSCA1O60232 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SSSCA1O60232 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SSSCA1O60232 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SSSCA1O60232 AC087393.1-201ENST00000582896 145 ntBASIC18.01■□□□□ 0.47
SSSCA1O60232 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SSSCA1O60232 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 AL353803.4-201ENST00000565882 1934 ntBASIC18.01■□□□□ 0.47
SSSCA1O60232 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SSSCA1O60232 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.01■□□□□ 0.47
SSSCA1O60232 SLC25A24-204ENST00000569674 2357 ntBASIC18.01■□□□□ 0.47
SSSCA1O60232 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SSSCA1O60232 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SSSCA1O60232 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18■□□□□ 0.47
SSSCA1O60232 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18■□□□□ 0.47
SSSCA1O60232 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SSSCA1O60232 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSSCA1O60232 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSSCA1O60232 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSSCA1O60232 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.99■□□□□ 0.47
SSSCA1O60232 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SSSCA1O60232 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSSCA1O60232 MIR639-201ENST00000384974 98 ntBASIC17.99■□□□□ 0.47
SSSCA1O60232 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.99■□□□□ 0.47
SSSCA1O60232 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SSSCA1O60232 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSSCA1O60232 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSSCA1O60232 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.98■□□□□ 0.47
SSSCA1O60232 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.98■□□□□ 0.47
SSSCA1O60232 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SSSCA1O60232 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SSSCA1O60232 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SSSCA1O60232 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.98■□□□□ 0.47
SSSCA1O60232 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSSCA1O60232 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSSCA1O60232 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms