Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDE6DO43924 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6DO43924 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6DO43924 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6DO43924 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6DO43924 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6DO43924 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6DO43924 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.15■□□□□ 0.34
PDE6DO43924 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDE6DO43924 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PDE6DO43924 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.15■□□□□ 0.34
PDE6DO43924 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6DO43924 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6DO43924 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.15■□□□□ 0.34
PDE6DO43924 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.15■□□□□ 0.34
PDE6DO43924 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.15■□□□□ 0.34
PDE6DO43924 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6DO43924 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PDE6DO43924 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6DO43924 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PDE6DO43924 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.14■□□□□ 0.33
PDE6DO43924 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6DO43924 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDE6DO43924 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.14■□□□□ 0.33
PDE6DO43924 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDE6DO43924 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDE6DO43924 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6DO43924 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.14■□□□□ 0.33
PDE6DO43924 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.14■□□□□ 0.33
PDE6DO43924 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDE6DO43924 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.13■□□□□ 0.33
PDE6DO43924 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.13■□□□□ 0.33
PDE6DO43924 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDE6DO43924 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6DO43924 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 AC092667.1-201ENST00000434301 2586 ntBASIC17.12■□□□□ 0.33
PDE6DO43924 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
PDE6DO43924 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PDE6DO43924 AC010542.4-201ENST00000563151 1910 ntBASIC17.12■□□□□ 0.33
PDE6DO43924 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDE6DO43924 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDE6DO43924 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6DO43924 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6DO43924 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6DO43924 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6DO43924 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDE6DO43924 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6DO43924 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6DO43924 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6DO43924 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDE6DO43924 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6DO43924 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 AC005229.4-201ENST00000610085 2198 ntBASIC17.11■□□□□ 0.33
PDE6DO43924 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 AC093536.1-201ENST00000569153 554 ntBASIC17.11■□□□□ 0.33
PDE6DO43924 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDE6DO43924 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6DO43924 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms