Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.04■□□□□ 0.96
UPK1AO00322 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPK1AO00322 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
UPK1AO00322 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.04■□□□□ 0.96
UPK1AO00322 UNC93B8-201ENST00000511903 705 ntBASIC21.04■□□□□ 0.96
UPK1AO00322 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.04■□□□□ 0.96
UPK1AO00322 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPK1AO00322 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
UPK1AO00322 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.03■□□□□ 0.96
UPK1AO00322 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
UPK1AO00322 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
UPK1AO00322 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.03■□□□□ 0.96
UPK1AO00322 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
UPK1AO00322 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.03■□□□□ 0.96
UPK1AO00322 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UPK1AO00322 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK1AO00322 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.02■□□□□ 0.96
UPK1AO00322 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1AO00322 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.02■□□□□ 0.95
UPK1AO00322 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.01■□□□□ 0.95
UPK1AO00322 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.01■□□□□ 0.95
UPK1AO00322 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1AO00322 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1AO00322 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.01■□□□□ 0.95
UPK1AO00322 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.01■□□□□ 0.95
UPK1AO00322 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.01■□□□□ 0.95
UPK1AO00322 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1AO00322 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1AO00322 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPK1AO00322 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK1AO00322 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21■□□□□ 0.95
UPK1AO00322 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
UPK1AO00322 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK1AO00322 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21■□□□□ 0.95
UPK1AO00322 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UPK1AO00322 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21■□□□□ 0.95
UPK1AO00322 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK1AO00322 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 GUSBP5-201ENST00000418136 578 ntBASIC20.99■□□□□ 0.95
UPK1AO00322 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.99■□□□□ 0.95
UPK1AO00322 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.99■□□□□ 0.95
UPK1AO00322 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UPK1AO00322 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1AO00322 ESRRAP2-201ENST00000418437 1549 ntBASIC20.99■□□□□ 0.95
UPK1AO00322 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1AO00322 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1AO00322 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.98■□□□□ 0.95
UPK1AO00322 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
UPK1AO00322 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.98■□□□□ 0.95
UPK1AO00322 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPK1AO00322 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1AO00322 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UPK1AO00322 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.98■□□□□ 0.95
UPK1AO00322 AL137060.1-201ENST00000618151 2648 ntBASIC20.98■□□□□ 0.95
UPK1AO00322 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
UPK1AO00322 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
UPK1AO00322 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
UPK1AO00322 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.97■□□□□ 0.95
UPK1AO00322 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.97■□□□□ 0.95
UPK1AO00322 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.97■□□□□ 0.95
UPK1AO00322 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UPK1AO00322 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.97■□□□□ 0.95
UPK1AO00322 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1AO00322 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UPK1AO00322 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UPK1AO00322 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.96■□□□□ 0.95
UPK1AO00322 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UPK1AO00322 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
UPK1AO00322 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.96■□□□□ 0.95
UPK1AO00322 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1AO00322 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.95
UPK1AO00322 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms