Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TLR4O00206 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
TLR4O00206 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.97■■□□□ 1.11
TLR4O00206 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TLR4O00206 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.97■■□□□ 1.11
TLR4O00206 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TLR4O00206 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TLR4O00206 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TLR4O00206 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
TLR4O00206 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TLR4O00206 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.97■■□□□ 1.11
TLR4O00206 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TLR4O00206 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TLR4O00206 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TLR4O00206 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.96■■□□□ 1.11
TLR4O00206 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.96■■□□□ 1.11
TLR4O00206 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 AP005435.1-201ENST00000529293 1178 ntBASIC21.96■■□□□ 1.11
TLR4O00206 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TLR4O00206 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.96■■□□□ 1.11
TLR4O00206 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TLR4O00206 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.95■■□□□ 1.1
TLR4O00206 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TLR4O00206 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TLR4O00206 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TLR4O00206 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.95■■□□□ 1.1
TLR4O00206 IKBKGP1-201ENST00000612193 1073 ntBASIC21.95■■□□□ 1.1
TLR4O00206 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR4O00206 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TLR4O00206 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.94■■□□□ 1.1
TLR4O00206 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.94■■□□□ 1.1
TLR4O00206 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TLR4O00206 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.94■■□□□ 1.1
TLR4O00206 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR4O00206 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR4O00206 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TLR4O00206 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TLR4O00206 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.93■■□□□ 1.1
TLR4O00206 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TLR4O00206 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
TLR4O00206 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.92■■□□□ 1.1
TLR4O00206 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 CCDC92B-201ENST00000575506 885 ntBASIC21.92■■□□□ 1.1
TLR4O00206 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.92■■□□□ 1.1
TLR4O00206 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.92■■□□□ 1.1
TLR4O00206 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TLR4O00206 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.92■■□□□ 1.1
TLR4O00206 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TLR4O00206 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TLR4O00206 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TLR4O00206 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.91■■□□□ 1.1
TLR4O00206 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR4O00206 AL137784.2-201ENST00000607332 1000 ntBASIC21.91■■□□□ 1.1
TLR4O00206 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TLR4O00206 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.91■■□□□ 1.1
TLR4O00206 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR4O00206 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR4O00206 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
TLR4O00206 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR4O00206 RARRES2P11-201ENST00000635158 484 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms